Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01483 ATGGCGAGAAAATACGAAGAAAATGCTATTGGAATAGACCTTGGCACCACAAACTCGTGTGTTGCAGTGTGGCTGGAGCAAGATTCTCGAGTTGAGATAATTTGCAATGATCTAGGATATAGAACAACTCCTTCTTTTGTTGCTTTTACCGATGAAGAAAAGTTGGTTGGTTTGGTTGCTAAGAAACGAGCTGGTGCTAACCCTCTAAACACTGTATTTGATGCTAAGAGTTTGTTCCTTTTTTCCTGGTGCGGTTTTACCACAGTGTTTCAATAA 276 0.4022 MARKYEENAIGIDLGTTNSCVAVWLEQDSRVEIICNDLGYRTTPSFVAFTDEEKLVGLVAKKRAGANPLNTVFDAKSLFLFSWCGFTTVFQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01483 91 PRINTS 70kDa heat shock protein signature 60 68 - -
Trre3g01483 91 PRINTS 70kDa heat shock protein signature 8 21 - -
Trre3g01483 91 PRINTS 70kDa heat shock protein signature 38 50 - -
Trre3g01483 91 PANTHER HEAT SHOCK PROTEIN 70KDA 9 78 IPR013126 GO:0005524|GO:0140662
Trre3g01483 91 FunFam heat shock 70 kDa protein-like 3 80 - -
Trre3g01483 91 Pfam Hsp70 protein 9 78 IPR013126 GO:0005524|GO:0140662
Trre3g01483 91 Gene3D - 1 80 - -
Trre3g01483 91 SUPERFAMILY Actin-like ATPase domain 9 85 IPR043129 -
Trre3g01483 91 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01483 Trre-Chr3 11598806 11602303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01483 1 79 Calmodulin-binding Proteins AT5G02490 65.823 1.89e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01483 K03283 - gmx:102667578 107.842