Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01468 ATGATGATAGCTATGGGGTCCATATGGATTATCTTTATTGCCATTGTTGGTGCTCTTTTGGTCCTAAGAGCCCTTCTCAAGAATGTGATCAATTGGTTGCTCTATGAAGCAAAACTTGGTGTTAAGCAATACTCTTTGCCACCAGGTGACATGGGATGGCCCTTAATTGGAAACATGTGGTCTTTCCTTAAAGCATTCAAGTCAAATGATCCAGATTCTTTCATGGCCTCTTTTGTTAAAAGGTTTGGAAACACGGGCATATACAAAGTATTAATGTTTGGAAACCCAAGTGTAATTGTGACAACACCAGAAGCATTTAAAAGAATTCGAACAGATGATGAAAATTTCATACCTGGTTGGCCACAATGTACAGTTGAACTAATTGGAGAAAAATCATTCATCAAAATGTCTTTTGAAGAACATAAACGTCTTAGGCGTTTAACATCATCTTCAATCAATGGATATGAAGCACTTTCAGTTTATTTGAAATATATTGAAGAAAATGTGATTAGTTCATTGGAGAAATGGACTCATATGGGTGAAATTGAGTTCTTAACTCAAATTAGAAAACTTATTTTTAAAATTATTGTGCATATTTTTCTTGGTTCAGAAAATGATCTTGTTATGGAGGCTTTGGAAAGAGAATACACAATGCTTAATCTTGGTGTTAGAGCCATGAGAATTAATATTCCTGGATTTGCATTCCACAAGGCACTCAAGGCTAGGAAAATTCTTGTGGCAATATTTCAATCAATTGTGGATAAGAGAAGAAATGAAAGGAAGGAAAAATTATTACCTGGCCAAAAAGCCAAAGATATGATGGATTCTTTGATAGATGTTGAAGATGAAAATGGAAGAAAATTGGATGATGATGAAATCATTGATATAATGTTGATGTACTTAAATGTTGGTCATGAATCTTTAGGGCATATCACCATGTGGGCTACCTATTTCCTGCAAGGGCATCCAAAAATTTTCAGAAAGGCAAAGGAGGAACAAGAGGAAATCCTAAGGAGAAGGCCTCCAACACAAAAAGGGTTGAAGCTAGAGGAAGTTAGACAAATGGAGTATCTTTCTAAGGTGATTGATGAAACAATGAGATTGATTACAATAGCACTAATGGTCTTTAGAGAAGCAAAATCAGATGTCAATATTAATGGTTACCTCATTCCAAAAGGTTGGAAAGTTCTAGTTTGGTTCAGATCAGTTCACCTTAATCCTGAAATTTATCCTAACCCAAAGAAGTTCAATCCTGATAGATGGAATGAGGTGCACAAAGTTGGAGAATTCCTTCCATTTGGAGTAGGAACTAGATTGTGCCCTGGCAATGATCTTGCTAAGCTAGAAATCTCAGTTTTCCTTCATCATTTTCTCCTCAATTATGAGATGGAACAACTTAACCCAAAATCTCCTGTGAGATTCTTACCACATACAAGGCCAGTGGACAATTGCTTGGCAAGGATCAAGAAACGTTCAGTTGTGTGA 1485 0.3609 MMIAMGSIWIIFIAIVGALLVLRALLKNVINWLLYEAKLGVKQYSLPPGDMGWPLIGNMWSFLKAFKSNDPDSFMASFVKRFGNTGIYKVLMFGNPSVIVTTPEAFKRIRTDDENFIPGWPQCTVELIGEKSFIKMSFEEHKRLRRLTSSSINGYEALSVYLKYIEENVISSLEKWTHMGEIEFLTQIRKLIFKIIVHIFLGSENDLVMEALEREYTMLNLGVRAMRINIPGFAFHKALKARKILVAIFQSIVDKRRNERKEKLLPGQKAKDMMDSLIDVEDENGRKLDDDEIIDIMLMYLNVGHESLGHITMWATYFLQGHPKIFRKAKEEQEEILRRRPPTQKGLKLEEVRQMEYLSKVIDETMRLITIALMVFREAKSDVNINGYLIPKGWKVLVWFRSVHLNPEIYPNPKKFNPDRWNEVHKVGEFLPFGVGTRLCPGNDLAKLEISVFLHHFLLNYEMEQLNPKSPVRFLPHTRPVDNCLARIKKRSVV 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01468 494 Pfam Cytochrome P450 47 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 FunFam Ent-kaurenoic acid oxidase 37 491 - -
Trre3g01468 494 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 Gene3D Cytochrome P450 37 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 SUPERFAMILY Cytochrome P450 42 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01468 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Trre3g01468 494 CDD CYP90-like 79 490 - -
Trre3g01468 494 PANTHER CYTOCHROME P450 26 43 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01468 Trre-Chr3 11366416 11372335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01468 3 488 Cytochrome P450 AT1G05160 62.449 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01468 K04123 - gmx:100781238 766.918