Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01383 ATGAACTCTTCTTCTTCTCTTCATCTCACATTGAGAGCTTTGTGCTGTGTACTGGTTGTGCTTGGAGGGTTACCCTTCTCTTTAGATGCACAACTTGATTCTTCCTTCTACAAGGACACTTGTCCCAATGTTACTTCCATTGTCCGTGAAGTTTTAACAAAGGTTTCCAACACAGATCCTCGTATGCTTGCTAGTTTCATTAGGCTTCACTTTCATGATTGTTTTGTTCAAGGTTGTGATGCATCAATCTTGTTGAATGAAACTTCTACAATTGTGAGTGAGCAAGGAGCTTTGCCAAATAACAATTCAATAAGAGGTTTGGATGTTGTGAATCAAATCAAAACCGCAGTGGAAAATGCTTGTCCTAATACAGTGTCTTGTGCTGATATTCTTGCGCTTGGTGCTAATATTTCCTCTGTTCTGGCTCTTGGTCCTGATTGGGAAGTTCCACTAGGAAGAAGAGATAGTTTAACAGCAAACCGAAGCCTTGCTAATAAAAACCTTCCTGGTCCCTCTTTTAATCTTACTCAACTAAAATCCTCGTTTGCTGATCAAGGTCTCGATACTACTGATCTAGTTGCACTTTCAGGTGCTCATACTATTGGTAAAGGTGTATGCCTTTTATTTGTTGATCGATTATACAATTTCAGTAATACTGGCAATCCCGATCCAACTCTTAACACAACCTACCTACAAACATTGCAAGCAATATGCCCTAATGGTGGACCTGGTACCAATCTCACCGATTTGGACTTAACCACTCCTGATACATTCGACTCAAGCTACTACTCTAATCTTCAAATTCAAAAGGGTTTGTTTCAGAGTGACCAAGAGTTGTTTTCCACTAGCGGCGCCGATACCATTGATATTGTCAATAGTTTTAGCAACAACCAAACTCTTTTCTTTGAAAACTTTAAGGCCTCGATGATTAAAATGGGTAATATTGGAGTGTTAACTGGATCTCAAGGTGAAATTAGAACACAATGTAACTTTGTTAATGGAAATTCTGTTGGTCTTGCTACAAAAGTCAATAGAGATTCTTCACAAGATGGTGTTGTTAGCACATACTAA 1071 0.3884 MNSSSSLHLTLRALCCVLVVLGGLPFSLDAQLDSSFYKDTCPNVTSIVREVLTKVSNTDPRMLASFIRLHFHDCFVQGCDASILLNETSTIVSEQGALPNNNSIRGLDVVNQIKTAVENACPNTVSCADILALGANISSVLALGPDWEVPLGRRDSLTANRSLANKNLPGPSFNLTQLKSSFADQGLDTTDLVALSGAHTIGKGVCLLFVDRLYNFSNTGNPDPTLNTTYLQTLQAICPNGGPGTNLTDLDLTTPDTFDSSYYSNLQIQKGLFQSDQELFSTSGADTIDIVNSFSNNQTLFFENFKASMIKMGNIGVLTGSQGEIRTQCNFVNGNSVGLATKVNRDSSQDGVVSTY 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01383 356 Gene3D Peroxidase, domain 2 169 312 - -
Trre3g01383 356 Gene3D - 36 333 - -
Trre3g01383 356 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 Pfam Peroxidase 48 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 ProSiteProfiles Plant heme peroxidase family profile. 31 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 SUPERFAMILY Heme-dependent peroxidases 31 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 CDD secretory_peroxidase 31 332 IPR033905 GO:0004601|GO:0042744
Trre3g01383 356 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 FunFam Peroxidase 35 181 - -
Trre3g01383 356 PANTHER PEROXIDASE 72-RELATED 29 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01383 356 FunFam Peroxidase 169 312 - -
Trre3g01383 356 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01383 Trre-Chr3 10642671 10645205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01383 17 336 Peroxidase AT5G06730 57.500 1.54e-129 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01383 K00430 - gmx:112997600 542.347