Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01379 ATGAACTCCATAGCAACTTCTCTATTATGTGTTGTGCTTTTAGTTCTAGGAGTACCCTTATCTTCAAATGCACAACTTAGTCCAACTTTTTACAGCAAAACATGTCCTAATGTTAGTTCCATTGTCAGCAATGTCTTAACAAATGTTTCTAAGACAGATCCAAGAATGCTTGCTAGTCTTGTCAGGCTTCACTTTCATGATTGTTTTGTTCAAGGATGTGATGCATCAGTTTTGCTGAACAATACTGCTACAATTGCACAAGGTCCTAGTTGGACAGTTCCATTAGGAAGAAGAGATAGTTTAACCGCGAACCAATCACTTGCTAATCAAAATCTTCCAGCTCCTTTTGACGCGTTGGATAAACTTAAATCTGCATTTGCTGCACAAGGCCTCAATACTACCGACCTAGTTGCACTCTCCGGTGCGCACACGTTTGGAAGAGCTCATTGCTCATTATTTGTTAGTCGATTGTACAACTTCAGCAGTACTGGTAGTCCTGATCCAACTCTTAACACAACTTATTTACAACAATTGCGTACAATATGTCCCAATGGTGGACCTGGCACAAACCTTACCAATTTTGATCCAACAACTCCCGATAAATTTGACAAGAACTATTACTCCAATCTTCAAGTAAAAAAAGGGTTGCTTCAAAGTGATCAAGAATTGTTCTCAACATCCGGTGCAGATACCATTACAATCGTCAACAAATTCAGCTCCGATCAAAACGCTTTTTTTGAGAGCTTTAAGGCCGCAATGATTAAAATGGGTAATATTGGTGTGCTAACGGGGACCAAAGGAGAGATTAGAAAACAATGCAATTTTGTTAATTCAAAATCAGCAGAACTAGGCTTAGCCACTATGACACAAGAATCATCGGAGGATGATCTTGTTAGCTCAATATAA 906 0.3896 MNSIATSLLCVVLLVLGVPLSSNAQLSPTFYSKTCPNVSSIVSNVLTNVSKTDPRMLASLVRLHFHDCFVQGCDASVLLNNTATIAQGPSWTVPLGRRDSLTANQSLANQNLPAPFDALDKLKSAFAAQGLNTTDLVALSGAHTFGRAHCSLFVSRLYNFSSTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGADTITIVNKFSSDQNAFFESFKAAMIKMGNIGVLTGTKGEIRKQCNFVNSKSAELGLATMTQESSEDDLVSSI 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01379 301 Pfam Peroxidase 44 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 Pfam Peroxidase 84 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 SUPERFAMILY Heme-dependent peroxidases 25 277 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 ProSiteProfiles Plant heme peroxidase family profile. 25 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 Gene3D Peroxidase, domain 2 113 256 - -
Trre3g01379 301 CDD secretory_peroxidase 25 276 IPR033905 GO:0004601|GO:0042744
Trre3g01379 301 PANTHER PEROXIDASE 72-RELATED 23 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 Gene3D - 85 277 - -
Trre3g01379 301 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 PRINTS Plant peroxidase signature 251 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 PRINTS Haem peroxidase superfamily signature 135 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01379 301 Gene3D - 26 84 - -
Trre3g01379 301 FunFam Peroxidase 113 256 - -
Trre3g01379 301 ProSitePatterns Peroxidases proximal heme-ligand signature. 135 145 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01379 Trre-Chr3 10612167 10614326 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01379 14 301 Peroxidase AT2G38380 48.688 2.04e-105 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01379 K00430 - gmx:112997600 426.017