Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01371 ATGCAAAAAATGAGTCCCATTTGTGTTATAGGTGTGACATTTTGGTGTGCAATTATGATACATGCAGGGTATGGTCAGCTTAATCCTTGGTTCTATAAGGAAACATGTCCATATTTATACACTATTGTGCTTAGAGTCATATTTGATGCTTCCCTCACTGATCCACGTATAGGTGCCAGTCTTATCAGGCTTCATTTTCATGATTGCTTTGTTCAAGGTTGCGATGGATCAGTTTTATTGAACAACACTAATAGAATAGTAAGTGAGCAAGGTGCACGTCCAAACATAAACTCAATTAGGGGTTTGGATGTTGTCAATAACATCAAGACAGCAGTGGAACATGCATGCCCCGCTACAGTCTCTTGTGCTGATATTCTTGCTATTGCGGCTGAAGTAGCTTCTTTTTTGGGAGGAGGTCCCTCATGGCCAATTCCATTGGGAAGAAGAGATAGTTTAACAGCAAACCGAAGCCTTGCGAATCAAAACCTTCCAGCACCAACCTTGAAGTTGGATCAACTTAAAGCTTCATTTCGTGCTCAAGGTCTTAACACTAGAGATTTAGTTACACTCTCAGGTGCTCATACATTTGGAAGAGCTCATTGTAACAATTTCATTCAACGTCTATACAATTTCAGCAATACTGGAAATCCTGATCCAACACTAAATATAAATTACTTAGTAACATTGCGACAATTATGTCCTCAAAATACAAAATTCAACAATATAAAAAATTTGGACATTACCTCACCAAATAAATTTGACAACAAATATTATTCCAATCTTAAAAACCACAATGGCTTACTTCAAACTGACCAAGAGCTATTCTCTACTCCTAATGCAGATACAATTGATATTGTCAATAGCTTTAGTAGTGATCAAGAGTTTTTCTTTGAGAATTTTAGGGTGTCAATGATTAAAATGGGATATATTGGTGTGTTAACCGGTAACAAAGGGGAAATTAGGAAGCATTGTAATTTTGTGAATGGTGCATAA 993 0.3676 MQKMSPICVIGVTFWCAIMIHAGYGQLNPWFYKETCPYLYTIVLRVIFDASLTDPRIGASLIRLHFHDCFVQGCDGSVLLNNTNRIVSEQGARPNINSIRGLDVVNNIKTAVEHACPATVSCADILAIAAEVASFLGGGPSWPIPLGRRDSLTANRSLANQNLPAPTLKLDQLKASFRAQGLNTRDLVTLSGAHTFGRAHCNNFIQRLYNFSNTGNPDPTLNINYLVTLRQLCPQNTKFNNIKNLDITSPNKFDNKYYSNLKNHNGLLQTDQELFSTPNADTIDIVNSFSSDQEFFFENFRVSMIKMGYIGVLTGNKGEIRKHCNFVNGA 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01371 330 FunFam Peroxidase 30 182 - -
Trre3g01371 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Trre3g01371 330 FunFam Peroxidase 164 307 - -
Trre3g01371 330 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601|GO:0042744
Trre3g01371 330 PANTHER PEROXIDASE 72-RELATED 23 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Trre3g01371 330 SUPERFAMILY Heme-dependent peroxidases 26 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 Gene3D Peroxidase, domain 2 164 307 - -
Trre3g01371 330 Gene3D - 31 328 - -
Trre3g01371 330 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 Pfam Peroxidase 50 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01371 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01371 Trre-Chr3 10556881 10559027 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01371 6 330 Peroxidase AT5G06720 55.623 1.01e-128 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01371 K00430 - gmx:548068 489.189