Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01361 ATGAACAACTTACTACCACCTGGACCATGGACACTGCCTCTCATAGGAAATATACATCAAGTTATTAGTAGATCATTGCCCCATCATCGCTTCAAAACTTTGGCTGATAAATATGGACCCTTAATGCACCTAAAACTAGGAGAGGTACCATACCTAATAGTTACTTCACCAACAATGGCCAAAGAGATTATGAAAACACATGACCTCAACTTTTGTGATAGGCCAAATCTTCTTTTATCCACAATATTTACGTATAATGCTACCGATATTGTCTTCTCTACATATGGAGAACACTGGAGGCGACTACGAAAGATATGTGTTGAACAACTATTAAGTGTAAAGCGTGTCGAATCATTTAGGTTTATAAGGGAAGAAGAAGTGTTAGATCTTGTTAAATCAATATTTTTAAGTGAAGGGTCGATTGTTAATCTTACTCAGAAGATTGGTTCATTGACATATGGAATTGTGGCGCGAGCGGCTTTTGGGAAAAAGAGCAAACACCAACAAGATTTCAAATCAGCAATAGAACAAGTGTTGAGTTTGTTAGGCGGAATTTGTATTTCGGATTTATATCCTTCTATTAAAATTCTTCCAAAGATGAGTAGGGCGAAGACTAAACTCGAAAAACTTCATAGACAGCTTGATATGATATTGCAAGAAATCATTGACGGTCATAAAAGCAGTCATAGTGAAGTATGCAAGGATGAAGATCTAGTTGATGCTCTTATCAAGATCCAACAAGAAAATGATTCCTCAAAAAATCCCTTGACTGATGACAATATAAAATCAATTGTCCAGGACATGTTTGCTGCTGGTAGTGAAACATCGTCAACGGTTGTGTTATGGGCGATATCTGAGATGATAAAGAATCCAAAGGTGATGGAAGCAGCACAAGTTGAGCTACTTTACCACTTTGATTGGAAACTTCCAAATGAAATGAAGAATGAAGATCTGGATATGACTGAGTCGTTTGGAATTACTCTAAGAAGAAAAAATGACCTATGTTTGATTCCTTTTACTCGCTGTCCTTAA 1032 0.3672 MNNLLPPGPWTLPLIGNIHQVISRSLPHHRFKTLADKYGPLMHLKLGEVPYLIVTSPTMAKEIMKTHDLNFCDRPNLLLSTIFTYNATDIVFSTYGEHWRRLRKICVEQLLSVKRVESFRFIREEEVLDLVKSIFLSEGSIVNLTQKIGSLTYGIVARAAFGKKSKHQQDFKSAIEQVLSLLGGICISDLYPSIKILPKMSRAKTKLEKLHRQLDMILQEIIDGHKSSHSEVCKDEDLVDALIKIQQENDSSKNPLTDDNIKSIVQDMFAAGSETSSTVVLWAISEMIKNPKVMEAAQVELLYHFDWKLPNEMKNEDLDMTESFGITLRRKNDLCLIPFTRCP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01361 343 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 301 - -
Trre3g01361 343 Pfam Cytochrome P450 6 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01361 343 SUPERFAMILY Cytochrome P450 5 341 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01361 343 Coils Coil 200 220 - -
Trre3g01361 343 PRINTS E-class P450 group I signature 280 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01361 343 PRINTS E-class P450 group I signature 35 54 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01361 343 PRINTS E-class P450 group I signature 59 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01361 343 PRINTS E-class P450 group I signature 151 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01361 343 PRINTS E-class P450 group I signature 260 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01361 343 Gene3D Cytochrome P450 1 322 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01361 Trre-Chr3 10468885 10470970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01361 5 301 Cytochrome P450 AT1G13110 37.013 2.39e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01361 - K23806 mtr:11442302 449.899