Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01303 ATGGGCACGGAGAATGAAATTTCTCCGGCCGATGCTCATCGGGCACCTCCCGGAAAAGAACAACAAGCTGCCGGCGTTGGAATCCTTCTTCAGATCATGATGTTAGTTTTATCCTTCGTTCTCGGTCATGTTCTCCGTCGCAAAAAGATTTACATCATTCCTGAAGCCAGTGCTTCTCTTCTCATAGGGTTAATTGTTGGTGTTTTAGCTAATATTTCAGATACTGAAACTAATATCAGGGCTTGGTTCAATTTTCATGAGGAGTTTTTTTTCCTGTTCCTGTTACCTCCGATCATATTTCAGTCTGGTTTCAGTCTTGCTCCTAAACCCTTTTTCTCAAATTTTGGTGCAATTGTGACATTTGCTATCTTTGGTACCTTTCTAGCTTCAATGGTAACAGGTGTCTTGGTTTATGTTGGTGGGTTGGTCTTCCTCATGTATAAACTACCTTTTGTTGAGTGCCTGATGTTTGGTGCTCTTATATCAGCAACCGATCCTGTTACTGTTTTGTCCATATTCCAGGAGCTGGGCACAGATGTCAATCTATATGCTTTGGTTTTCGGAGAATCTGTTTTGAATGATGCAATGGCAATTTCTTTGTACAGGACAATGTCATTGGTTAGAAATAATCCATCTGGACAAAATTTCTTCATGGTGGTTGTTAGATTTTTGGAGACTTTTGTTGGGTCTTTGTCTACAGGTGTTGGAGTTGGGTTTACATCTGCTTTGCTATTTAAGTATGCAGGCTTGGATATTGACAACCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTCTTCCCTTATTTCTCGTACATGCTGTCTGAAGGCCTTGGTTTGTCCGGTATTGTATCAATATTATTCACTGGAATTGTCATGAAGCACTATGCGTATTCAAATTTGTCACAAAGTTCTCAAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAAACATTTATATTTATATACATGGGCTTTGACATTGCTATGGAACAACATAGCTGGTCTCATGTTGGATTTATATTCTTCTCGATTATATTCATTGTAATTGCAAGAGCCGCAAATGTCTTCTCTTGTGCTTACCTGGTCAATCTGGTCAGACCTGCTCATCGAAAGATACCTTCAAAACACCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGACCATATTCACTGCAACTACAGCAATAGTTGTTTTGACGGTATTGCTGATTGGTGGTTCAACAGGTACCATGCTGGAAGCTCTAGATGTCGTAGGTGGTGACAATCACAGCGATAGCTCTTTGGCTTCAATTGGTCCCATCACAAATTACGGGGGGAACAATGGTTATGTTGCTCCTTCATATGAGGAGGAGGAGGAAGAATCATCGTCGTCTGGGAACAAAATAAAGATGAAGCTAAAAGAACTCCACAAGAGTGCTGCATCTTTTACGGCATTAGATAGAAACTATCTTACCCCATTCTTTACAAGCCATAATGGAGATGAAGATGAAGAAGCCGAGCCTCTTACTTCTTCGAGATCTTCTTTTACTTCTTCAAGATCAGGATTTCACGGCCAGAGCCCTTATTCATCATGA 1647 0.408 MGTENEISPADAHRAPPGKEQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYIIPEASASLLIGLIVGVLANISDTETNIRAWFNFHEEFFFLFLLPPIIFQSGFSLAPKPFFSNFGAIVTFAIFGTFLASMVTGVLVYVGGLVFLMYKLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSLVRNNPSGQNFFMVVVRFLETFVGSLSTGVGVGFTSALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLSEGLGLSGIVSILFTGIVMKHYAYSNLSQSSQRFVSAFFELISSLAETFIFIYMGFDIAMEQHSWSHVGFIFFSIIFIVIARAANVFSCAYLVNLVRPAHRKIPSKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGGSTGTMLEALDVVGGDNHSDSSLASIGPITNYGGNNGYVAPSYEEEEEESSSSGNKIKMKLKELHKSAASFTALDRNYLTPFFTSHNGDEDEEAEPLTSSRSSFTSSRSGFHGQSPYSS 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01303 548 Gene3D - 151 202 - -
Trre3g01303 548 PANTHER SODIUM/HYDROGEN EXCHANGER 11 533 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Trre3g01303 548 NCBIfam sodium/hydrogen exchanger 3 32 447 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre3g01303 548 Pfam Sodium/hydrogen exchanger family 34 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre3g01303 548 MobiDBLite consensus disorder prediction 527 548 - -
Trre3g01303 548 PRINTS Na+/H+ exchanger signature 158 168 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre3g01303 548 PRINTS Na+/H+ exchanger signature 118 126 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre3g01303 548 PRINTS Na+/H+ exchanger signature 89 100 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre3g01303 548 PRINTS Na+/H+ exchanger signature 103 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre3g01303 548 MobiDBLite consensus disorder prediction 511 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01303 Trre-Chr3 9875555 9884226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01303 32 525 Antiporters AT5G55470 30.210 4.16e-51 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01303 K14724 - gmx:100790830 887.871