Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01265 ATGGGTCTTACGCCTGATTTTCTCTCTTTGTGCCTTGAATTCTCTTGGACTTTTTTGCTTGTTGTGATATTTTCCTTTATGATTTTCAGAGTCACTAAAAGTCACAAGTCCAAGAAATACAGACTACCTCCAGGTCCCAAACCGTGGCCTATTGTTGGCAATCTCCCTGAGATGCTTGCAAACAAGCCTGCATCTATATGGATACACAAGCTGATGAAAGAAATGAACACTGAAATAGCTTGTATCCGCCTAGGAAATTCCATTGTTATCCCTGTGACATGCCCCACCATTGCCTGTGAATTCTTGAAAAAACATGATGCTTCTTTTGCATCGAGGCCAAAAATCATGTCCGCTGACATAGCCAGCTATGGTTTCACAACCACGGTTCTTACACCCTATGGGGAACAATGGAAGAAGATGAAGAGAGTGTTGGTCAACAACTTGCTTTCCCCTCTAAAGCATCAATGGCTTCTAGGTAAAAGGAATGAAGAAGCTGATAACCTTGTGTTTTACATCTACAACAAATGTTGCAAAGATGTGAATGACGATGCTGGCCTTGTGAATATTCGGACCGCGGCGCAACATTATGGTGGTAATGTGTTCAGGAAATTGATTTTCAATACAAGGTACTTTGGAAAGGGAATGGAGGATGGAGGGCCAGGTTTTGAGGAAGTTGAGCATGTAGATGCTACTTTCACAATACTTAAATATATTTATGCTTTTTCAATTTCTGATTATGTTCCATTCTTGAGGAGACTTGACTTGGATGGCCATAGGAGCAAAATCATGAAAGCTATAAGGATCATGAAGAAGTATCATGATCCCATTATTCATGATAGAATCAAACAGTGGAATGATGGATTGAAGACCGTTGAAGAAGACTTACTGGACGTGCTGATCTCACTCAAAGATGCCAACAATAAACCATTACTGACATTTATGGAAATCAAGGCGCAAATTACTGAATTGGCAATTGAAATGGTGGACAATCCATCAAATGCGTTTGAATGGGCACTAGCAGAAATGTTAAACCAACCTGAGTTGCTGAAACGAGCCACTGAAGAATTGGACAATGTGGTTGGCAAAGAGAGGCTGGTCCAAGAATCAGATATTCATAAGCTCCCATTTGTTAGAGCTTGCGCAAGAGAAGCTCTTCGACTTCACCCCATGGAGTATTTCGATGTTCCCCATGTTTCCATGAGTGACACAATGGTCGGTGACTACATGTTCCCAAAAGGAACTCAAGTACTACTAAGTAGAGTTGCTCTCGGAAGAAACCCAAAATTCTGGACTGATCCCCTAAAGTTCAACCCAGATCGCCATCTCAAGGCGGGTGATGATGTGGTTTTGACGGAGCCGGATTTGAGATTCATATCCTTCAGCACTGGAAGACGTAGTTGTCCTGGAGTAGTACTTGGCACCACAATGACTATAATGTTATTTGCTAGGATGCTACATGGCTTCAGCTGGAGTGCACCACCAAACGTATCAAGCATCGATCTTGTCCCGTCCCATGATTGCCTCTTTCTAGCAAAGCCACTTCTAGCTGTGGCAAAACCAAGATTGGCTGCAGAGCTCTACCGTACTAATTAA 1593 0.4237 MGLTPDFLSLCLEFSWTFLLVVIFSFMIFRVTKSHKSKKYRLPPGPKPWPIVGNLPEMLANKPASIWIHKLMKEMNTEIACIRLGNSIVIPVTCPTIACEFLKKHDASFASRPKIMSADIASYGFTTTVLTPYGEQWKKMKRVLVNNLLSPLKHQWLLGKRNEEADNLVFYIYNKCCKDVNDDAGLVNIRTAAQHYGGNVFRKLIFNTRYFGKGMEDGGPGFEEVEHVDATFTILKYIYAFSISDYVPFLRRLDLDGHRSKIMKAIRIMKKYHDPIIHDRIKQWNDGLKTVEEDLLDVLISLKDANNKPLLTFMEIKAQITELAIEMVDNPSNAFEWALAEMLNQPELLKRATEELDNVVGKERLVQESDIHKLPFVRACAREALRLHPMEYFDVPHVSMSDTMVGDYMFPKGTQVLLSRVALGRNPKFWTDPLKFNPDRHLKAGDDVVLTEPDLRFISFSTGRRSCPGVVLGTTMTIMLFARMLHGFSWSAPPNVSSIDLVPSHDCLFLAKPLLAVAKPRLAAELYRTN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01265 530 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01265 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01265 530 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01265 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01265 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01265 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01265 530 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01265 530 SUPERFAMILY Cytochrome P450 43 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01265 530 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 14 528 - -
Trre3g01265 530 Pfam Cytochrome P450 43 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01265 530 CDD CYP79 77 522 - -
Trre3g01265 530 FunFam Cytochrome P450 9 35 525 - -
Trre3g01265 530 Gene3D Cytochrome P450 35 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g01265 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01265 Trre-Chr3 9536184 9537911 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01265 17 529 Cytochrome P450 AT5G05260 50.667 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01265 - K14984 ag:AAT11920 976.852