Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01081 ATGAACTCCATAGCAACTTCTCTATTATGTGTTGTGCTTTTAGTTCTTCTAGGACTACCCTTATCTTCAAATGCACAACTTAGTCCAACTTTTTACAGCAAAACATGTCCTAATGTTAGTTCCATTGTCAGCAATGTCTTAACAAATGTTTCTAAGACAGATCCAAGAATGCTTGCTAGTCTTGTCAGACTTCACTTTCATGATTGTTTTGTTCAAGGATGTGATGCATCAAGGTTTGGATGTTGTGAATCAAATCAAAACAGCAGTGGAAAAAGCTTGTCCAAACACAGTTTCTTGTGCCGATATTCTTACACTTGCTGCTCAAGCATCCTCTGTTCTGCACAAGGTCCTGGTTGGACAGTTCCATTAGGAAGAAGAGATAGTTTAACGGCAAACCAATCACTTGCTAATCAAAATCTTCCCGCTCCTTTTGACGCGTTGGATAAACTTAAATCTGCATTTGCGGCACAAGGCCTCAATACTACCGACCTAGTTGCACTCTCCGGTGCGCACACGTTTGGAAGAGCTCATTGCTCATTATTTGTTAGTCGATTGTACAACTTCAGTAGTACTGGAAGTCCTGATCCAACTCTTAACACAACTTATTTACAACAATTGCGTACAATATGTCCCAATGGTGGACCTGGCACAAACCTTACCAATTTTGATCCAACAACTCCCGATAAATTTGACAAGAACTATTACTCCAATCTTCAAGTAAAAAAAGGGTTGCTTCAAAGTGATCAAGAATTGTTCTCAACATCCGGTGCAGATACCATTACCATCGTCAACAAATTCAGCTCCGATCAAAATGCGTTTTTTGAGAGCTTTAAGGCCGCGATGATTAAAATGGGAAATATTGGTGTGCTAACGGGGACCAAAGGAGAGATTAGAAAACAATGCAATTTTGTTAATTCAAAATCAGCAGAACTAGGCTTAGCCACTATGACACAAGAATCATCAGAGGATGATCTTGTTAGCTCAATATAA 990 0.3939 MNSIATSLLCVVLLVLLGLPLSSNAQLSPTFYSKTCPNVSSIVSNVLTNVSKTDPRMLASLVRLHFHDCFVQGCDASRFGCCESNQNSSGKSLSKHSFLCRYSYTCCSSILCSAQGPGWTVPLGRRDSLTANQSLANQNLPAPFDALDKLKSAFAAQGLNTTDLVALSGAHTFGRAHCSLFVSRLYNFSSTGSPDPTLNTTYLQQLRTICPNGGPGTNLTNFDPTTPDKFDKNYYSNLQVKKGLLQSDQELFSTSGADTITIVNKFSSDQNAFFESFKAAMIKMGNIGVLTGTKGEIRKQCNFVNSKSAELGLATMTQESSEDDLVSSI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01081 329 CDD secretory_peroxidase 26 304 IPR033905 GO:0004601|GO:0042744
Trre3g01081 329 PRINTS Plant peroxidase signature 279 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 PRINTS Plant peroxidase signature 237 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 PRINTS Plant peroxidase signature 221 236 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 SUPERFAMILY Heme-dependent peroxidases 26 305 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 FunFam Peroxidase 141 284 - -
Trre3g01081 329 ProSiteProfiles Plant heme peroxidase family profile. 26 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 163 173 IPR019793 -
Trre3g01081 329 Gene3D - 113 305 - -
Trre3g01081 329 PRINTS Haem peroxidase superfamily signature 163 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 PRINTS Haem peroxidase superfamily signature 223 238 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 PRINTS Haem peroxidase superfamily signature 115 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 Gene3D - 27 99 - -
Trre3g01081 329 Pfam Peroxidase 114 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 Pfam Peroxidase 45 83 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre3g01081 329 Gene3D Peroxidase, domain 2 141 284 - -
Trre3g01081 329 PANTHER PEROXIDASE 72-RELATED 24 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01081 Trre-Chr3 7823788 7827869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01081 22 329 Peroxidase AT2G38380 49.699 9.20e-105 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01081 K00430 - gmx:111064645 420.624