LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre3g01079	ATGAATCCACTTGGTCTAAGATCAACAGCTTTATGTTGTGTGGTTGTGTTTGTCCTAATTGGAGGAACAAATGCACAATTAGATCCTTCATTTTACAATACTACATGTTCTAATGTTTCTTCAATTGTTCGTAGTGTCCTCTCAAATGTTTCACAATCTGATCCAAGAATTCTTGCTAGTCTCATCAGACTACACTTTCATGACTGTTTTGTTCAAGGATGTGATGCCTCAATTTTGTTGTGA	243	0.358	MNPLGLRSTALCCVVVFVLIGGTNAQLDPSFYNTTCSNVSSIVRSVLSNVSQSDPRILASLIRLHFHDCFVQGCDASILL	80

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre3g01079	80	Gene3D	-	27	80	-	-
	Trre3g01079	80	Pfam	Peroxidase	43	80	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trre3g01079	80	ProSiteProfiles	Plant heme peroxidase family profile.	26	80	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Trre3g01079	80	PANTHER	PEROXIDASE 72-RELATED	24	80	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trre3g01079	80	SUPERFAMILY	Heme-dependent peroxidases	9	80	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Trre3g01079	80	PRINTS	Plant peroxidase signature	36	55	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Trre3g01079	80	PRINTS	Plant peroxidase signature	60	80	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre3g01079	Trre-Chr3	7792420	7793324	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre3g01079	14	80	Peroxidase	AT5G06720	62.687	8.48e-23	87.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre3g01079	K00430		-	gmx:100814455	116.316