Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01074 ATGATAGAGGCATTTGATGTTGACGTGGCACTAGCACGAGGGAAGCGTTGCAGTGAGAGTAGCGGAAGCGACCACTCACCCGAGAGTTCAACTGATTTGTCTGATCTTGTATTGTCTTTCATGGAAGACAACGAAAGATCAGAGGAAAAAGAAGATATTGTTCATCGCAAAAATGGAGATGAAGATGATGAGAAGGATCATGGAGAAAGGGTTGAAAATATTGGTGAATGGTGTGATAATGAGAAGAGTGAAATGTTGAAGGGATTGTTCGATGGGAATGAAGATGTTGATGAGGATGAAAGGAATGCCAAAGAATTGATTAGGAGAGAAGTTGAAGTTGCAATTGAAATTGTTGGAAGTGATTCAATTGATGATGGATTCAAACGTCGATTGATGTCTCGATTGAGGGAAAAAGGTCTTGATGCCGGGCTTTGCAAAACCAAATGGGAGAAAAAGGGGAAATTAACAGCCGGCGATTACGAATACATTGATGTCAATTTTTCTGGAAAACGTTACATAATCGAAGTTTCTCTAGCTACTGAATTCGAAATAGCTCGTCCAACAAACCAATATTCATCCTTATTAAATATTTTCCCAAGAATTTTTGTGGGCAAGATGGAAGAGCTCAAACGAATTGTGAGACTAATGTGCTCAGCAATTAAAGGCTCAATGAAAAAAATGGACTTACACATACCACCATGGAGGAGAAATTTGTACATGCAAACAAAGTGGTTTAGTTCTTACAAAAGAACAACTAATGCAATTGCAACTAAAAAAGTATCGTCACATTTTTCAGCTGAGTCATTTTTTCCTAAAAAATTTATGGGATTTGAAGCACGGCATGTGAAAGCATATAATTGTAGAGATGATTATGTGGGGATTAATAATGGATTTAGAATTGGACACTTGACTGCTGCATTAAAATCTGACAACTTTGGATTATGA 945 0.3746 MIEAFDVDVALARGKRCSESSGSDHSPESSTDLSDLVLSFMEDNERSEEKEDIVHRKNGDEDDEKDHGERVENIGEWCDNEKSEMLKGLFDGNEDVDEDERNAKELIRREVEVAIEIVGSDSIDDGFKRRLMSRLREKGLDAGLCKTKWEKKGKLTAGDYEYIDVNFSGKRYIIEVSLATEFEIARPTNQYSSLLNIFPRIFVGKMEELKRIVRLMCSAIKGSMKKMDLHIPPWRRNLYMQTKWFSSYKRTTNAIATKKVSSHFSAESFFPKKFMGFEARHVKAYNCRDDYVGINNGFRIGHLTAALKSDNFGL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01074 314 PANTHER OS03G0796600 PROTEIN 5 254 IPR006502 -
Trre3g01074 314 Pfam PDDEXK-like family of unknown function 34 250 IPR006502 -
Trre3g01074 314 MobiDBLite consensus disorder prediction 39 74 - -
Trre3g01074 314 NCBIfam uncharacterized plant-specific domain TIGR01615 128 251 IPR006502 -
Trre3g01074 314 MobiDBLite consensus disorder prediction 23 37 - -
Trre3g01074 314 MobiDBLite consensus disorder prediction 13 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01074 Trre-Chr3 7747871 7749252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01074 23 208 Core Cell Cycle Gene Families AT1G47220 26.829 9.75e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01074 - - psat:127115838 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g01074 3 7747871 7749252 Trre3g01074 3 7747871 7749252 ECH