Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01073 ATGGCTAATCTTCCAATGAGATTTCATAGAATGATAGAGGCATTTGATGTTGACGTGGCACTAGCACGAGGGAAGCGTTGCAGTGAGAGTAGCGGAAGCGACCACTCACCCGAGAGTTCAACTGATTTGTCTGATCTTGTATTGTCTTTCATGGAAGACAACGAAAGATCAGAGGAAAAAGAAGATATTGTTCATCGCAAAAATGGAGATGAAGATGATGAGAAGGATCATGGAGAAAGGGTTGAAAATATTGGTGAATGGTGTGATAATGAGAAGAGTGAAATGTTGAAGGGATTGTTCGATGGGAATGAAGATGTTGATGAGGATGAAAGGAATGCCAAAGAATTGATTAGGAGAGAAGTTGAAGTTGCAATTGAAATTGTTGGAAGTGATTCAATTGATGATGGATTCAAACGTCGATTGATGTCTCGATTGAGGGAAAAAGGTCTTGATGCCGGGCTTTGCAAAACCAAATGGGAGAAAAAGGGGAAATTAACAGCCGGCGATTACGAATACATTGATGTCAATTTTTCTGGAAAACGTTACATAATCGAAGTTTCTCTAGCTACTGAATTCGAAATAGCTCGTCCAACAAACCAATATTCATCCTTATTAAATATTTTCCCAAGAATTTTTGTGGGCAAGATGGAAGAGCTCAAACGAATTGTGAGACTAATGTGCTCAGCAATTAAAGGCTCAATGAAAAAAATGGACTTACACATACCACCATGGAGGAGAAATTTGTACATGCAAACAAAGTGGTTTAGTTCTTACAAAAGAACAACTAATGCAATTGCAACTAAAAAAGTATCGTCACATTTTTCAGCTGAGTCATTTTTTCCTAAAAAATTTATGGGATTTGAAGCACGGCATGTGAAAGCATATAATTGTAGAGATGATTATGTGGGGATTAATAATGGATTTAGAATTGGACACTTGACTGCTGCATTAAAATCTGACAACTTTGGATTATGA 975 0.3733 MANLPMRFHRMIEAFDVDVALARGKRCSESSGSDHSPESSTDLSDLVLSFMEDNERSEEKEDIVHRKNGDEDDEKDHGERVENIGEWCDNEKSEMLKGLFDGNEDVDEDERNAKELIRREVEVAIEIVGSDSIDDGFKRRLMSRLREKGLDAGLCKTKWEKKGKLTAGDYEYIDVNFSGKRYIIEVSLATEFEIARPTNQYSSLLNIFPRIFVGKMEELKRIVRLMCSAIKGSMKKMDLHIPPWRRNLYMQTKWFSSYKRTTNAIATKKVSSHFSAESFFPKKFMGFEARHVKAYNCRDDYVGINNGFRIGHLTAALKSDNFGL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01073 324 PANTHER OS03G0796600 PROTEIN 14 264 IPR006502 -
Trre3g01073 324 MobiDBLite consensus disorder prediction 26 84 - -
Trre3g01073 324 MobiDBLite consensus disorder prediction 33 47 - -
Trre3g01073 324 MobiDBLite consensus disorder prediction 49 84 - -
Trre3g01073 324 Pfam PDDEXK-like family of unknown function 44 260 IPR006502 -
Trre3g01073 324 NCBIfam uncharacterized plant-specific domain TIGR01615 138 261 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01073 Trre-Chr3 7747871 7749282 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01073 33 218 Core Cell Cycle Gene Families AT1G47220 26.829 9.80e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01073 - - psat:127115838 467.618