Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01069 ATGGACAAAGGTTGGGGACTTGCTCTTGATACTTCTTCATCTTCATCTCCAATACCAATTTCATCTTTGAACTCTTTCTCAAGACACAACATCAACGATAATAATAATAATAATAGAATGTTTCCTATCTTAGGATTCCCTGTTAATCTTACCCGTAATACAAACGGCGCCGAAGACGGCGGTGACCGGAAAATAACCAGTGAAGTCGATTTCTTCTCCGATAGAAATAAGTCATCATCTTCAGCTTCACATGACCAACATGTTAAATCCAACATCGTCAAAAAAGAGATTATTTCAACCGATGAAAAGCACGTTAATACTGGTTTACAACTTGCAAACACCGGGAGTGATCAATCTGTAGTAGATGATGGAGTTTCATCTGATGCTGAAAATAAACGTGCCAAGACCACTGAGCTTGCACAATTGCAAGTGGAGCTTCAAAGGATGAATTCAGAGAACAAAAAGCTTAAAGAAATGCTTAATCATGTTACCGGTAATTACACGGCTTTGCAGATGCAACTTGTCGCATTAATGCAAAAGAATCACCACACTGAAAATGAGGTTGTTAATGCAAAAGCTGAGGAGAAAAATCAAGGTGTTAGTGGAGAAATGGTACCAAGACAATTTCTTGCAATAACTAATGGAACAAGAGAAGTTGATGAACAAGTATCAAATTCTTCATCTGATGAAAGAACAAGATCAAACACACCTATGAATAATCATATTGAAGGTGGAACAAGAGATCATATAAGAAATAACAATGGCAAAATTGGTAGAGAAGATAGTCCAGAATCAGAAACACAAGGTTGGGGTCCTAATAAGGCTCAAAAAATATTGAACTCTTCCAATGTTACCGATCAAGCAAATACCGAAGCTACAATGAGAAAAGCTCGTGTCTCCGTTCGTGCTAGATCGGAAGCTTCAATGATTAGCGATGGATGCCAATGGAGAAAATATGGCCAAAAAATGGCGAAAGGAAATCCATGTCCTCGCGCATATTATAGATGCACTATGGCAGTTGGTTGTCCCGTCCGCAAACAAGTTCAACGTTGTGCCGAGGACAAAACAATTTTAGTAACAACATATGAAGGAACACATAATCATCCATTACCACCAGCAGCAATGGCAATGGCATCAACAACTTCAGCAGCAGCAAGTATGTTACTATCAGGATCAATGTCAAGTGCAGATGGAATAATGACACCAAATTTATTAGCAAGAGCTATTCTTCCTTGTTCAACAAGTATGGCAACACTTTCAGCATCGGCACCATTTCCAACTGTTACATTAGATCTTACACAAAACTCAAATCCAAATCCAAATCCATTGCAATTTCAAAGACCTCATCATTCACCATTTCAAGTACCTAATTTTTTTCAAGGACAACAACAATCTCAGAATTTTGCACAAGCAGCTGCATCACTTTATAATCAATCTAAATTCTCTGGTCTTCAATTGTCTCAAGAAGTTGGTTCTTCTCATTTAACTGCACAAGCTCCAACACAACAACAACAGCAACAACAACAGCCTTCTTTGGCCAACTCGGTTAGCGCCGCAACTGCTGCGATCACCGCCGATCCAAATTTCACTGCTGTTCTCGCCGCCGCTATTTCTTCCATTATTGGGGGTGGTCATGGAAACAATAACAATGCCAACACCAACAATAATAGTAGAAGTAGTATTAGCAACTTTTCAGGAAACTAA 1704 0.3897 MDKGWGLALDTSSSSSPIPISSLNSFSRHNINDNNNNNRMFPILGFPVNLTRNTNGAEDGGDRKITSEVDFFSDRNKSSSSASHDQHVKSNIVKKEIISTDEKHVNTGLQLANTGSDQSVVDDGVSSDAENKRAKTTELAQLQVELQRMNSENKKLKEMLNHVTGNYTALQMQLVALMQKNHHTENEVVNAKAEEKNQGVSGEMVPRQFLAITNGTREVDEQVSNSSSDERTRSNTPMNNHIEGGTRDHIRNNNGKIGREDSPESETQGWGPNKAQKILNSSNVTDQANTEATMRKARVSVRARSEASMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILVTTYEGTHNHPLPPAAMAMASTTSAAASMLLSGSMSSADGIMTPNLLARAILPCSTSMATLSASAPFPTVTLDLTQNSNPNPNPLQFQRPHHSPFQVPNFFQGQQQSQNFAQAAASLYNQSKFSGLQLSQEVGSSHLTAQAPTQQQQQQQQPSLANSVSAATAAITADPNFTAVLAAAISSIIGGGHGNNNNANTNNNSRSSISNFSGN 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01069 567 Coils Coil 132 166 - -
Trre3g01069 567 Coils Coil 174 194 - -
Trre3g01069 567 MobiDBLite consensus disorder prediction 215 242 - -
Trre3g01069 567 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 107 555 IPR044810 GO:0003700
Trre3g01069 567 Gene3D WRKY domain 295 372 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre3g01069 567 ProSiteProfiles WRKY domain profile. 305 371 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre3g01069 567 MobiDBLite consensus disorder prediction 8 23 - -
Trre3g01069 567 Pfam WRKY DNA -binding domain 312 369 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre3g01069 567 SUPERFAMILY WRKY DNA-binding domain 303 371 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre3g01069 567 MobiDBLite consensus disorder prediction 244 263 - -
Trre3g01069 567 SMART WRKY_cls 310 370 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre3g01069 567 MobiDBLite consensus disorder prediction 1 23 - -
Trre3g01069 567 MobiDBLite consensus disorder prediction 266 294 - -
Trre3g01069 567 MobiDBLite consensus disorder prediction 212 298 - -
Trre3g01069 567 FunFam probable WRKY transcription factor 31 295 372 - -
Trre3g01069 567 MobiDBLite consensus disorder prediction 544 567 - -
Trre3g01069 567 MobiDBLite consensus disorder prediction 432 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01069 Trre-Chr3 7694206 7696812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01069 1 550 WRKY Transcription Factor Family AT1G62300 50.582 1.87e-153 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre3g01069 WRKY 5.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01069 - - gmx:100802124 671.003