Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g01024 ATGAGTCAACTCGGTTTATTATTGCAGGAACCGGTCACCACCACCACGTCGACGACTCAAACTGAGTCAAGAACGATTCTCGGTTTATTAAGAGAAGAACAAATGGACGGTCTTGATGGTTTGCCTCGTAGAAGACGTAGCTTCAAGGAACGGTTAGGATTCATCGGTTTTGGTTGTTGTGGGACCACATGGGGATTCCGTTCTTCTTCTTCTTCAACACAATTATCTCAGAATATTCAGCAACAAATTCCGGATTTGGATATGGATATGGATACGGATCCGGGTCATGATCCGAATATTTGTGTTGGTTTAACGGCTCCGACGAGTTCGGGTTCAAGTTCGAGTATGAATCTTGCGGCGGCGTTAGCGGCGGAGAGACAACTCCGAGGAGTAGGACAAGCGACGGAAACGAACGTTGTTGGAGTGGGGAGGATGCCGGGGACGCCGTGGAGAGTGTCGTTGATGCGGTTGTTGGAGGAAACGGAAAATGGGGATACGGTGGCGGGAGTGTCTAAGGTGGCGGAGGAGAAAGTTTGTAGTAGTGTTGCGGGGAATGATTCGGTGTGTTGCGTGTGCATGGGGAGGAATAAAGATTTTAATAACCCTTGTCCGTTCGGGTGGGCTGTCTTGCGCGTTTTGGTCTAG 645 0.4946 MSQLGLLLQEPVTTTTSTTQTESRTILGLLREEQMDGLDGLPRRRRSFKERLGFIGFGCCGTTWGFRSSSSSTQLSQNIQQQIPDLDMDMDTDPGHDPNICVGLTAPTSSGSSSSMNLAAALAAERQLRGVGQATETNVVGVGRMPGTPWRVSLMRLLEETENGDTVAGVSKVAEEKVCSSVAGNDSVCCVCMGRNKDFNNPCPFGWAVLRVLV 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g01024 214 MobiDBLite consensus disorder prediction 1 21 - -
Trre3g01024 214 PANTHER OS01G0917900 PROTEIN 16 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g01024 Trre-Chr3 7376376 7377909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g01024 26 197 C3H Transcription Factor Family AT4G22250 41.143 1.82e-26 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g01024 - - gmx:100804959 146.747