Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00995 ATGAAGAGTAAAATTGAAAGTAGCACTCTCAAAGAATCCTCAACTCAAACCATGTCTTCATCTTCATCCTCTTCTCTTATTAGCGGAGTTGTTGATAATAACCTTTCATATCTATCTGAAGTGCGAACTGTTCACTACCGTTTTAATTCTGGTCATCCAGATGTAAATTTTAAACCACCTGCAGTGAGACCTTATGTTCGATCGAAAATGCCTCGGCTTCGATGGACACCAGATCTTCACCGTTGCTTTGCGCATGCAGTTGAAAGGCTTGGAGGAGAAGAAAGGGCTACACCAAAGTTAATTTTACAACTAATGAATGTAAGGGGGATTACTATATCTCATGTCAAAAGCCACCTCCAGATGTATAGGAGCATGAAACAGGAGCTGATGATTCAAGAAGCAAAGAAGAATGATATGGCAGCAGGTTTATTAGCTTCAACAAACTCCTCCTCAGCCCTTGTTCCAAGCTGCCAACAGAGTCCTGGCCAAACACAGAATGCTTATGAGTCAGAGTCTTACAATGGAAATCAAGTGAATCAATCGGTTATTATTTGTAACGGTGATGAGCAGAAGATGCACACATACATCATCTTTGAGGGTATTCTCGGAAGCCATACTGTCCAAGCCAACAAAAGGAACCACGCCAGCGGGGTTGAAAAAGTGAATGAAGAAGACACATTGTCCCTCTTAACAAGCTCAAATGGTTCAAACACAAATTATGTCTCTCTTGAGCTCACGCTCAACTGA 747 0.415 MKSKIESSTLKESSTQTMSSSSSSSLISGVVDNNLSYLSEVRTVHYRFNSGHPDVNFKPPAVRPYVRSKMPRLRWTPDLHRCFAHAVERLGGEERATPKLILQLMNVRGITISHVKSHLQMYRSMKQELMIQEAKKNDMAAGLLASTNSSSALVPSCQQSPGQTQNAYESESYNGNQVNQSVIICNGDEQKMHTYIIFEGILGSHTVQANKRNHASGVEKVNEEDTLSLLTSSNGSNTNYVSLELTLN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00995 248 Gene3D - 70 127 - -
Trre3g00995 248 Pfam Myb-like DNA-binding domain 73 123 IPR001005 -
Trre3g00995 248 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 22 169 IPR046955 GO:0003700
Trre3g00995 248 MobiDBLite consensus disorder prediction 1 27 - -
Trre3g00995 248 NCBIfam myb-like DNA-binding domain, SHAQKYF class 71 125 IPR006447 GO:0003677
Trre3g00995 248 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 127 IPR017930 -
Trre3g00995 248 FunFam Myb family transcription factor 69 127 - -
Trre3g00995 248 MobiDBLite consensus disorder prediction 8 27 - -
Trre3g00995 248 SUPERFAMILY Homeodomain-like 69 127 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00995 Trre-Chr3 7132303 7136280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00995 61 130 G2-like Transcription Factor Family AT1G14600 67.143 1.04e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre3g00995 Myb_DNA-binding 6.7e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00995 - - gmx:100798980 231.106