Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00981 ATGGAAACAATTTCTAATATGTTGTTGGTCTTCTTGATGTTACCCTTTTTCCTCCTTAACATGATTAGTTGTGAGGAAGATGAGGTGAAGAGAACACTGATACAGTTCCTGACACAACTCAAAGGCCAGCAGAACAATAATTCCACTTTGCTTTGGAAACCAGACACCGATCCTTGTAAAGATCGGTGGAATGGTGTAATCTGTGATGCTCAAATGTCTATAAAGAGATTGGATCTTTACAGGTTCAATTTGTCCGGAACCCTTGATGTTGCCTTGCTTTGCAATTCGCAGCCTCTAGCTGCATCGCTCACCTTTCTTAGTCTTGATGACAACAACATCAGTGGTGGAATAGCATCTGAGATTGGAAATTGCAAACAACTCACTCGCCTTCACCTAAGCGGAAACCAACTTGCTGGAAACCTTCCTACTTCGCTTGCCACGTTAAACAATTTGAAAAGACTAGACCTTTCGAACAACAAGTTTTCGGGACCGTTGCCAAACCTGGATAGAATCTCAGGCCTCAATATGTTCCTAGCACAAAACAATGACCTCAGTGGAAATATACCAGCATTGTATTTCTCTAATTTTGACCATTTCAATGTTTCTTTTAACAATTTCAGTGGCCTAATTCCAGACGTGCAAGGTTATTTCACTGCCGACAGTTTTCTCGGTAATCCAGGACTATGCGGATATCCACTACAGAAAAATTGTTCCAGTCAGATTCTGCGGAGTACTTCCAGTAAGATATCAGAAGACGAATCAAAGGGTCCTTCTAAAGAGCAGATGCTTATCTATTCAGGCTATGCTGCATTAGGTGTTATCATAATCCTTATTGTAGTCTTGAAGATATGTAGCGGAAAGAAACAAGGAAAGAAAATTGAAGCAGAATCGAACGGTGATATCGAAAAAACAAGCTATATTTCAAGTGAATCCAAAGCAGAAGAAGCAAGCAAATCAGGATTTTCAGTTTCATCTGAAAATGGAATGGTCTCACAACAATCACTTATTGTTCTTGCAAGGCCAATGGTGAATGAATTGAAAATGGAGGACTTGTTAAGAGCACCTGCTGAAATGATTGGTAGAGGGAAGAATGGAAGTCTTTATAAGGTGATGCTAACCAATGGAATAGTAGTTGTTGTGAAAAGGATTAAGGATTGGAGTATTTCTAGTGTTGAATTCAAGCAAAGAATGCAACTATTGAATCAAGCAAAACATCCTCATGTTCTTTCACCTCTTGCTTTCTATTGTACCAAACAAGAGAAACTTTTGGTCTATGAATATCAGCAAAATGGAAGTTTGTTCAAGCTTCTACATGGTAAATCAAAAACTTTTGATTGGACCAGTAGACTTGGAATAGCATCTACAATTGCTGAAGCATTAGCTTTCATGCATCAAGAGCTAGGCCAACATGGTATTATTCATGGTAACATGAAATCATCAAACATTTTACTAAACAATAACATGGAGCCTTTTATAAGTGAATATGGTACTATGCCTAAGAATGATCAACAAAGTTCAACTTTTGCAACACCTATTGCTAATGATGCATTCAAAGGAGATGTTTATGGCTTTGGTGTTATTCTTCTTGAACTACTTACTGGAAAATTGGTGAAGAATGATGGTATTGACTTAACTGATTGGGTTCAATCAGTTGTAAGGGAAGAATGGACAGGTGAAGTGTTTGATAGGTCATTATTGAAAGAGTATGCAAGTGAAGAGAGGATGGTTAATATGCTTCAAGTGGCTATAAGATGTGTTAATAGATCCTTAGAAGCTAGGCCAAGTATGAATCAAGTGGTTCTTATGATTAACACTATCAAAGATGAAGAGGAAAAATCATTGATTTACCAAGTTTGA 1857 0.3775 METISNMLLVFLMLPFFLLNMISCEEDEVKRTLIQFLTQLKGQQNNNSTLLWKPDTDPCKDRWNGVICDAQMSIKRLDLYRFNLSGTLDVALLCNSQPLAASLTFLSLDDNNISGGIASEIGNCKQLTRLHLSGNQLAGNLPTSLATLNNLKRLDLSNNKFSGPLPNLDRISGLNMFLAQNNDLSGNIPALYFSNFDHFNVSFNNFSGLIPDVQGYFTADSFLGNPGLCGYPLQKNCSSQILRSTSSKISEDESKGPSKEQMLIYSGYAALGVIIILIVVLKICSGKKQGKKIEAESNGDIEKTSYISSESKAEEASKSGFSVSSENGMVSQQSLIVLARPMVNELKMEDLLRAPAEMIGRGKNGSLYKVMLTNGIVVVVKRIKDWSISSVEFKQRMQLLNQAKHPHVLSPLAFYCTKQEKLLVYEYQQNGSLFKLLHGKSKTFDWTSRLGIASTIAEALAFMHQELGQHGIIHGNMKSSNILLNNNMEPFISEYGTMPKNDQQSSTFATPIANDAFKGDVYGFGVILLELLTGKLVKNDGIDLTDWVQSVVREEWTGEVFDRSLLKEYASEERMVNMLQVAIRCVNRSLEARPSMNQVVLMINTIKDEEEKSLIYQV 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00981 618 ProSiteProfiles Protein kinase domain profile. 353 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00981 618 ProSiteProfiles Leucine-rich repeat profile. 150 172 IPR001611 GO:0005515
Trre3g00981 618 SUPERFAMILY Protein kinase-like (PK-like) 357 603 IPR011009 -
Trre3g00981 618 Gene3D Ribonuclease Inhibitor 29 192 IPR032675 -
Trre3g00981 618 Gene3D Phosphorylase Kinase; domain 1 322 427 - -
Trre3g00981 618 PANTHER OS05G0588300 PROTEIN 7 608 - -
Trre3g00981 618 Pfam Protein kinase domain 357 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00981 618 FunFam Leucine-rich repeat receptor protein kinase EMS1 93 191 - -
Trre3g00981 618 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Trre3g00981 618 Gene3D Transferase(Phosphotransferase) domain 1 429 617 - -
Trre3g00981 618 SUPERFAMILY L domain-like 51 233 - -
Trre3g00981 618 Gene3D Ribonuclease Inhibitor 196 235 IPR032675 -
Trre3g00981 618 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00981 Trre-Chr3 7021694 7024057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00981 52 607 Receptor kinase-like Gene Family AT1G68400 36.423 7.78e-91 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre3g00981 Pkinase 1.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00981 - - psat:127078038 1005.36