Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00950 ATGTCAAAAGTAGCAGTTTCATTCACTCACATCATAAAAAGTGGAGAACCAGCTTTCAGTGTTCTAGTATCAACATTCTTGCTTGGAGAAGCATTTCCCATGCCAGTTTACCTCTCATTGTTACCAATAATTGGAGGTTGTGCACTAGCTGCTATAACTGAGCTCAACTTCAACATGATTGGTTTTATGGGAGCTATGATATCAAATTTAGCATTTGTATTCAGGAACATATTCTCAAAGAAAGGGATGAATGGAATGAGTGTTAGTGGAATGAACTATTATGCTTGTCTTTCAATGTTGTCTCTATTGATTCTCACACCTTTTGCCATTGCTGTGGAGGGTCCTAAAGTTTGGGCTGCTGGCTGGCAAACAGCTGTGTCTCAGATTGGTCCCAACTTTGTATGGTGGGTGGTTGCACAAAGTGTGTTCTACCATTTGTACAATCAAGTCTCATACATGTCACTTGATCAGATTTCTCCCTTAACATTCAGCATAGGAAACACAATGAAGAGAATTTCTGTAATAGTCGCTTCCATCATTATCTTTCACACACCACTTCAACCTATCAATGCTCTTGGAGCAGCAATTGCAATTCTTGGAACCTTCATCTATTCACAGGCTAAACAGAACTAA 633 0.3934 MSKVAVSFTHIIKSGEPAFSVLVSTFLLGEAFPMPVYLSLLPIIGGCALAAITELNFNMIGFMGAMISNLAFVFRNIFSKKGMNGMSVSGMNYYACLSMLSLLILTPFAIAVEGPKVWAAGWQTAVSQIGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPLQPINALGAAIAILGTFIYSQAKQN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00950 210 PANTHER SOLUTE CARRIER FAMILY 35 4 208 - -
Trre3g00950 210 SUPERFAMILY Multidrug resistance efflux transporter EmrE 108 206 - -
Trre3g00950 210 Pfam Triose-phosphate Transporter family 1 205 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00950 Trre-Chr3 6788367 6789731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00950 1 210 Antiporters AT1G61800 88.571 2.08e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00950 K15283 - gmx:100804205 388.652