Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00949 ATGATCTCTTCAATCAAATGCACAACATCATCATCACTCATCACTAGCACAAAACTTCCTCTTCCAAGGTCACAATTTTCAATTCTACCAACTATTCAAAATGTTGAACAAAACATGGATTTCCCTCTACTTTCTTCCAAGAAACCTCTCTACCTTTCATCCATTGAGAATTTTGCATTATTGACAAAACCCAAAAGAAAGAATGTGACTAAGTGTCTAGCCTATGAGGCTGATAGATCAAGGCCACTAGAGATTAATATTGAGCTTCCTAATGAAGAATCAACTCAAAAATTCAAAATTGGATTGTATTTTGCTACTTGGTGGGCTTTGAATGTTGTGTTCAACATATATAACAAGAAAGTTTTGAATGTTTTTCCTTATCCTTGGCTTACTTCAACTTTGTCCTTAGCTGCTGGTTCTCTCATGATGTTAATCTCATGGGCCACTAGAATTGCTGATGCCCCAAAAGTTGATTTGGATTTCTGGAAAGCCCTTTTTCCTGTAGCTGTAGCACCATAG 519 0.3661 MISSIKCTTSSSLITSTKLPLPRSQFSILPTIQNVEQNMDFPLLSSKKPLYLSSIENFALLTKPKRKNVTKCLAYEADRSRPLEINIELPNEESTQKFKIGLYFATWWALNVVFNIYNKKVLNVFPYPWLTSTLSLAAGSLMMLISWATRIADAPKVDLDFWKALFPVAVAP 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00949 172 Pfam Triose-phosphate Transporter family 99 171 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00949 Trre-Chr3 6786625 6787745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00949 25 171 Antiporters AT1G61800 69.595 2.62e-65 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00949 K15283 K05350 gmx:100804205 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00949 3 6786625 6787745 Trre3g00949 3 6786625 6787745 ECH