Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00807 ATGCTTTCCTTCGCTCGATATAGCATTGCTCATTCTCAAGAATTCAGGTGGCAGGCTAACATAAAAGAAAAGACCAACGAGAAAACTAACGACAGCCAACCAACAGACAAGCTACAACACAAAGTATACAGCAACGAGAAAAGAGGCCCATCTTTTGTTCTTCCTTTCATAGGAAACGCAATCCCATTGGTTCGTGACCCAACAAAATTTTGGGACCTTCAATCAACATTAGCCAAATCAACTCCTTTGGGCTTTTCAGCTAACTATATCATTGGAAACTTCATAGTTTTCATTAGAGATACAGAACTTTCACATAAGATTTTCTCAAATGTTAAGCCCAATGCTTTTCATCTCGTGGGTCATCCATTTGGTAAGAAACTCTTTGGTCAACATAATCTTATTTACATGATGGGCCAAGAACACAAGAATCTCCGCCGTCGGATTGCTCCGAATTTTACGCCTAAAGCACTTTCCACCTACACCTCGCTGCAGCAGATTATTATTCTCAAACATCTTAAATCATGGGTTGAGAAAGCCCAAGCCCAAGCCCGTGAGTCTATTCCAATACGTGTTTTGGCTCGTGACATGAATTTAGAAACCTCTCAGACAGTTTTCGTGGGCCCCTATTTGGGCCTGAAAGCCCGAGAGAGATTTGAGCATGATTACTTTCTATTCAACGTTGGTCTCATGAAGCTTCCGTTTGACTTTCCTGGAACAGCGTTTCGTAACGCGAGACTCGCCGTTGACCGTCTCGCCGGAACACTGGCGAATTGCACGGCGATGAGTAAGGCGAAGATGGAGAAAGGTGAAGAAGAACCGTCGTGTCTCATTGATTTCTGGATGCAGGATACGATAAGAGAGATTGAAGAATCAAAGCTAAACGGAGTTACGGCGGCGCCGTTTTCCACTAACGCCGAAATCGGCGGTTATCTCTTTGATTTCCTCTTCGCAGCACAGGATGCTTCAACGTCGTCGTTGCTATGGGCGGTGGCGCTGCTTGATTCACATCCAGAAGTTCTTGCCAAAGTCAGGGAAGAAGTCGCCGGAATCTGGTCGCCGGAGTCGGACAAATTAATAACGGCTGATCAGTTAAGAGAAATGAAGTACACTCAAGCGGTGGCGCGTGAGGTTATTAGATACAGACCGCCGGCGACTCTGGTGCCACATATTGCGGCGGAGAATTTTCCGTTAACGGAAAACTACACAATTCCGAAAGGAGCAATCGTTTTTCCGTCGGCTTTTGAGTCATCGTTTCAAGGTTTTACTGAACCGGACCGGTTCGATCCAGACCGGTTTTCAGAAGAAAGACAAGAGGATCAAATATTTAAAAGAAATTTTCTAGCGTTTGGAGCTGGGCCCCACCAATGTGTGGGCCAGAGATGA 1383 0.4541 MLSFARYSIAHSQEFRWQANIKEKTNEKTNDSQPTDKLQHKVYSNEKRGPSFVLPFIGNAIPLVRDPTKFWDLQSTLAKSTPLGFSANYIIGNFIVFIRDTELSHKIFSNVKPNAFHLVGHPFGKKLFGQHNLIYMMGQEHKNLRRRIAPNFTPKALSTYTSLQQIIILKHLKSWVEKAQAQARESIPIRVLARDMNLETSQTVFVGPYLGLKARERFEHDYFLFNVGLMKLPFDFPGTAFRNARLAVDRLAGTLANCTAMSKAKMEKGEEEPSCLIDFWMQDTIREIEESKLNGVTAAPFSTNAEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLAKVREEVAGIWSPESDKLITADQLREMKYTQAVAREVIRYRPPATLVPHIAAENFPLTENYTIPKGAIVFPSAFESSFQGFTEPDRFDPDRFSEERQEDQIFKRNFLAFGAGPHQCVGQR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00807 460 Pfam Cytochrome P450 53 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 PRINTS P450 superfamily signature 456 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 CDD CYP61_CYP710 84 460 - -
Trre3g00807 460 SUPERFAMILY Cytochrome P450 50 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Trre3g00807 460 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 PRINTS E-class P450 group I signature 456 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00807 460 PANTHER CYTOCHROME P450 26 50 459 - -
Trre3g00807 460 FunFam Cytochrome P450 61 38 460 - -
Trre3g00807 460 Gene3D Cytochrome P450 37 460 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00807 Trre-Chr3 5651904 5655839 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00807 49 460 Cytochrome P450 AT2G34500 69.175 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00807 K09832 - gmx:100808148 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00807 3 5651904 5655839 Trre3g00807 3 5651904 5655839 ECH