Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00806 ATGAATACTACTATTACTACCACTACTACTAATCTCATCAAATCCATATTATCAATAACAACATCAACAACATCTTTGTCTATAATCCAATTAATCCCTTACATAATCTGCTTTCTCCTTTTCCTTCTCCTTCTTGAACAGATCTCATACCTAACTAAAAAAAGTTTCATACCAGGCCCATCTTTTGTTCTTCCTTTCATAGGAAACGCAATCCCATTGGTTCGTGACCCAACAAAATTTTGGGACCTTCAATCAACATTAGCCAAATCAACTCCTTTGGGCTTTTCAGCTAACTATATCATTGGAAACTTCATAGTTTTCATTAGAGATACAGAACTTTCACATAAGATTTTCTCAAATGTTAAGCCCAATGCTTTTCATCTCGTGGGTCATCCATTTGGTAAGAAACTCTTTGGTCAACATAATCTTATTTACATGATGGGCCAAGAACACAAGAATCTCCGCCGTCGGATTGCTCCGAATTTTACGCCTAAAGCACTTTCCACCTACACCTCGCTGCAGCAGATTATTATTCTCAAACATCTTAAATCATGGGTTGAGAAAGCCCAAGCCCAAGCCCGTGAGTCTATTCCAATACGTGTTTTGGCTCGTGACATGAATTTAGAAACCTCTCAGACAGTTTTCGTGGGCCCCTATTTGGGCCTGAAAGCCCGAGAGAGATTTGAGCATGATTACTTTCTATTCAACGTTGGTCTCATGAAGCTTCCGTTTGACTTTCCTGGAACAGCGTTTCGTAACGCGAGACTCGCCGTTGACCGTCTCGCCGGAACACTGGCGAATTGCACGGCGATGAGTAAGGCGAAGATGGAGAAAGGTGAAGAAGAACCGTCGTGTCTCATTGATTTCTGGATGCAGGATACGATAAGAGAGATTGAAGAATCAAAGCTAAACGGAGTTACGGCGGCGCCGTTTTCCACTAACGCCGAAATCGGCGGTTATCTCTTTGATTTCCTCTTCGCAGCACAGGATGCTTCAACGTCGTCGTTGCTATGGGCGGTGGCGCTGCTTGATTCACATCCAGAAGTTCTTGCCAAAGTCAGGGAAGAAGTCGCCGGAATCTGGTCGCCGGAGTCGGACAAATTAATAACGGCTGATCAGTTAAGAGAAATGAAGTACACTCAAGCGGTGGCGCGTGAGGTTATTAGATACAGACCGCCGGCGACTCTGGTGCCACATATTGCGGCGGAGAATTTTCCGTTAACGGAAAACTACACAATTCCGAAAGGAGCAATCGTTTTTCCGTCGGCTTTTGAGTCATCGTTTCAAGGTTTTACTGAACCGGACCGGTTCGATCCAGACCGGTTTTCAGAAGAAAGACAAGAGGATCAAATATTTAAAAGAAATTTTCTAGCGTTTGGAGCTGGGCCCCACCAATGTGTGGGCCAGAGGTATGCATTGAATCATCTTGTTCTCTTCATTGCTATGTTTACATCATTGATTGATTTCAAGAGAGATAGAATGGACGGCTGTGATGAAATCGTTTATGTTCCTACCATTTGTCCTAAAGATGATTGTAGGGTTTTTCTGTCTAAGCGTTGCACAAGGTACCCTTCCTTTCATGGGGTTGAGGGGCTTGGTAAATGA 1605 0.4349 MNTTITTTTTNLIKSILSITTSTTSLSIIQLIPYIICFLLFLLLLEQISYLTKKSFIPGPSFVLPFIGNAIPLVRDPTKFWDLQSTLAKSTPLGFSANYIIGNFIVFIRDTELSHKIFSNVKPNAFHLVGHPFGKKLFGQHNLIYMMGQEHKNLRRRIAPNFTPKALSTYTSLQQIIILKHLKSWVEKAQAQARESIPIRVLARDMNLETSQTVFVGPYLGLKARERFEHDYFLFNVGLMKLPFDFPGTAFRNARLAVDRLAGTLANCTAMSKAKMEKGEEEPSCLIDFWMQDTIREIEESKLNGVTAAPFSTNAEIGGYLFDFLFAAQDASTSSLLWAVALLDSHPEVLAKVREEVAGIWSPESDKLITADQLREMKYTQAVAREVIRYRPPATLVPHIAAENFPLTENYTIPKGAIVFPSAFESSFQGFTEPDRFDPDRFSEERQEDQIFKRNFLAFGAGPHQCVGQRYALNHLVLFIAMFTSLIDFKRDRMDGCDEIVYVPTICPKDDCRVFLSKRCTRYPSFHGVEGLGK 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00806 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Trre3g00806 534 CDD CYP61_CYP710 94 512 - -
Trre3g00806 534 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 FunFam Cytochrome P450 61 47 519 - -
Trre3g00806 534 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 PANTHER CYTOCHROME P450 26 55 484 - -
Trre3g00806 534 Pfam Cytochrome P450 58 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 Gene3D Cytochrome P450 49 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00806 534 SUPERFAMILY Cytochrome P450 50 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00806 Trre-Chr3 5651831 5653435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00806 25 526 Cytochrome P450 AT2G34500 68.986 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00806 K09832 - gmx:100808148 875.93