Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00792 ATGGGGAAACTAATAACAACTTCCAAACCTCTCATTCTCAAATCAAAACTCCTCTGTTTTTCACTTTTCTATCTCTTCACAACTCTCTTTCTTGCACTTTACACCACTCTCTCTCAATCTAAATGCTTCTTTAGATCATCACCTTCAGATCCCATTCTCAATTCTCTCTTCAATTACCCTTCTTCCTATGGTGAACACAAATATGCTGTTTCAACCACTCGTTCCACGTGTTCTTCCCCTGTTTTCTTTTCAGATTATTGGGATGTTGTCAAAGAAATCGAGAATTTTAGGACGAATTCTCGAGGTTATGACCGTGTTTTAAGGTATATGCAGGGGAATGCTGATACTTTTGGTGGGAATCTTAGTACAATTACGAGGTTTTCTTATTTTAATCATCGAAATGATAGCATTGATGTTCCATGTGGATTTCTCAAGGAATTTCCAATCAGTAATTCTGACCAAATTGCCATGGAAAAGTGTGACAATGTAGTAGTAGTTTCAGCAATCTTCAATGATCATGACAAAATAAGACAACCAAAAGGACTTGGATCAAAAACACTAGAAAATGTATGTTTCTTCATGTTTGTGGATGAAGTTACCCTCAAAGGTCTAGCTTATCATGGATTAATTTCAATAAAATCCAAAGAATATAAGATAGGTGTATGGAGGATTGTGAAGGTAGCAACAGAAAATTTGTATCAAAATCCAGCAATGAATGGAATTATACCAAAATATTTAGTCCATAGACTATTCCCAAATTCACAATTCAGCATTTGGATTGATGCAAAGTTGCAACTCATGGTTGATCCTTTGTTGTTGATTCATTCACTTGTTATAAATGAGAATGTAGATATGGCTATATCTAAACACCCTTTTTATGTTCATACAATGGAAGAAGCTATGGCAACTGCTAGGTGGAAAAAATGGTGGGATGTTAATGGCTTAAAGGTGCAAATGGAGACTTATTGTGAAAATGGTATGGAACCATGGAGTCCTAAGAAGCTACCCTATGCATCAGATGTACCAGACAGTGCATTGATATTAAGGAGGCATGGAGTAGGAAACAACCTATTTTCTTGTCTAATATTCAATGAGTTAGAAGCATTTAATCCAAGAGATCAATTACCTTTTGCATTTGTTAGAGATCACATGAATCCCAAACTGAAACTAAACATGTTTGAGGTAGAAGTTTTTGAACAAGTGGCAGTTGAGTATAGGCACAATCTTAAGAGTAGTGATGGGACCAGTTTGAAGAAAATGTCTAGTTCAAGAAGAACCAAAAGAGCAGAGCCAGATTTATATGTTAATAATGGTAGCTGTTGTGGTGGGTGCCACAAGTATCTTTCTACTATGTGGGGTGAATCCAATGATTGA 1374 0.3603 MGKLITTSKPLILKSKLLCFSLFYLFTTLFLALYTTLSQSKCFFRSSPSDPILNSLFNYPSSYGEHKYAVSTTRSTCSSPVFFSDYWDVVKEIENFRTNSRGYDRVLRYMQGNADTFGGNLSTITRFSYFNHRNDSIDVPCGFLKEFPISNSDQIAMEKCDNVVVVSAIFNDHDKIRQPKGLGSKTLENVCFFMFVDEVTLKGLAYHGLISIKSKEYKIGVWRIVKVATENLYQNPAMNGIIPKYLVHRLFPNSQFSIWIDAKLQLMVDPLLLIHSLVINENVDMAISKHPFYVHTMEEAMATARWKKWWDVNGLKVQMETYCENGMEPWSPKKLPYASDVPDSALILRRHGVGNNLFSCLIFNELEAFNPRDQLPFAFVRDHMNPKLKLNMFEVEVFEQVAVEYRHNLKSSDGTSLKKMSSSRRTKRAEPDLYVNNGSCCGGCHKYLSTMWGESND 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00792 457 Pfam Protein of unknown function (DUF616) 112 407 IPR006852 -
Trre3g00792 457 PANTHER ALKALINE CERAMIDASE-RELATED 10 412 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00792 Trre-Chr3 5538346 5541404 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00792 3 5538346 5541404 Trre3g00792 3 5538346 5541404 ECH
Trre3g00792 3 5538346 5541404 Trre7g04782 7 55286006 55291645 PCT