Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00764 ATGCAACAGGATTGGTTGTATCATCTAAATCAAGTTAAAAAGTCAAGTTTGAATTTTCAAACAAGACAAGACAAGATTACAAGTGCTTCTATGATAATAATACCAGAGTACTATTATCATCCAGAGTACTCAACCATGGGTCGAGAAATATTCTCACCAACACCCTCGAAACCGGAAGCTGCCCTCACATGCTCTTTTATGATCAAAGAGTTTGCAGGTGTGGCTGTTAATACCAATCAGCGCATGAATGGTTATCCTTGTCCGCCTTATAAGATAATTGTTCTGGATGAAGCAGATTCAATGACAGAAGATGCTCAGGCATGTTTAATGCGCTCAATGGAAACTCACTCTAAGGTTACTCGGTTCTTTTTTATATGCAACTACATTAGCAGGATTATAGAACCACTTGCTTCAAGGTGTGCAAAGTTCAGGTTTAAGCCGCTGACAGAAGAAATCATGAGCAACCGAATATTATACATCTGCAATGAAGAAGGAATCCACCTTGATGCCGAGGGTCTTTCATTTCTTCGAAGGACCTGA 540 0.3963 MQQDWLYHLNQVKKSSLNFQTRQDKITSASMIIIPEYYYHPEYSTMGREIFSPTPSKPEAALTCSFMIKEFAGVAVNTNQRMNGYPCPPYKIIVLDEADSMTEDAQACLMRSMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLTEEIMSNRILYICNEEGIHLDAEGLSFLRRT 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00764 179 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 67 171 - -
Trre3g00764 179 Pfam DNA polymerase III, delta subunit 89 148 - -
Trre3g00764 179 Gene3D - 8 147 IPR027417 -
Trre3g00764 179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 177 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00764 Trre-Chr3 5346857 5348560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00764 68 176 Core DNA Replication Machinery Family AT1G21690 78.899 1.36e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00764 K10755 - cit:102616275 182.57