Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00759 ATGGAGAATGAGATTGAACAATGTAAGTTTCCAAGACTTGGAAATGTCCTAAACAGTTCAATGAATTCTGGTAGAAAGAAAAATGTTGGAGGAAGTGATTTTGAAAGTAGTAGTTGGCAGCAACATCAACAGAACTCTTCAAGAATTGTTAGAGTTTCTAGAGCTTCTGGTGGAAAAGATAGACATAGTAAAGTAATGACTTCGAAGGGTTTGAGAGATCGAAGAGTTAGGTTATCGGTTACAACGGCTATTCAATTCTATGATATTCAAGATAGACTTGGTTATGATCAACCTAGTAAAGCTGTTGATTGGTTAATCAAAGCTGCTTCTGATTCTATCTCAGAACTTCCTTCTCTCAATAGTATATTCACGCAAACCGATCCGAAACAACCTAGTTATGAGAATCAAAGCGAGAATCAGAAACCGAAACAGAACCATAACAGTAACAACTTTTGTTTGTCTAAGTCTGGTTGTAGTAGTACTTCTGAGACAAGTAAAGAGAATGAGTGTAGCATCATTGGACAAGAACAAAAACATCATCAGAATATGTCTCAAACTGGTTCTTTCACTGAGTTACTTACTGGTGGAATTGGTAGTAGTACTGTAACAAGTACTAATGGATCAATTCATGATCAGATTCATCATCATGGTGGTTTCTCAGGACATTCACTTCAAGTTTCACCATTTAGTGGTGAAAATGAAAACAACTCAGATATTACTCAGTTGCAGCATTTTCCATTTATGTCATCATCTTCTGATCAACAAAATGGGAATCATGATAATTATAATCTCAACTTCACGATATCGTCTTCGGGCCTTGTTGGTTACAATAGGGGGACCCTTCAGTCCAATTCAATTTTACCTCATTTTCAGAGGTTTTCACCTGTTATGGATCATGGATCATCAACTTCATCATCATCCAATAATCTACCTTTCTTTATGGGAGCTGCTGCTGCTGCTCCTGCTGCTGCTGCTGCTGCAACCATGGATCAACAACATCTTCAATTCTCACCTCTCTTTGATGCTCGTTTGCAACTTTTCTATGGCGATGGAAGTCGGCATTCGGATCAAAAGGAAAAATGCAATAAGAACTGA 1095 0.3772 MENEIEQCKFPRLGNVLNSSMNSGRKKNVGGSDFESSSWQQHQQNSSRIVRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDIQDRLGYDQPSKAVDWLIKAASDSISELPSLNSIFTQTDPKQPSYENQSENQKPKQNHNSNNFCLSKSGCSSTSETSKENECSIIGQEQKHHQNMSQTGSFTELLTGGIGSSTVTSTNGSIHDQIHHHGGFSGHSLQVSPFSGENENNSDITQLQHFPFMSSSSDQQNGNHDNYNLNFTISSSGLVGYNRGTLQSNSILPHFQRFSPVMDHGSSTSSSSNNLPFFMGAAAAAPAAAAAATMDQQHLQFSPLFDARLQLFYGDGSRHSDQKEKCNKN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00759 364 MobiDBLite consensus disorder prediction 19 70 - -
Trre3g00759 364 MobiDBLite consensus disorder prediction 203 237 - -
Trre3g00759 364 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 283 IPR005333 GO:0003700
Trre3g00759 364 MobiDBLite consensus disorder prediction 19 52 - -
Trre3g00759 364 MobiDBLite consensus disorder prediction 54 70 - -
Trre3g00759 364 ProSiteProfiles TCP domain profile. 58 116 IPR017887 -
Trre3g00759 364 MobiDBLite consensus disorder prediction 122 150 - -
Trre3g00759 364 MobiDBLite consensus disorder prediction 223 237 - -
Trre3g00759 364 Pfam TCP family transcription factor 57 173 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00759 Trre-Chr3 5302380 5303474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00759 46 360 TCP Transcription Factor Family AT1G30210 39.349 2.32e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre3g00759 TCP 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00759 - - psat:127079830 441.81