Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00756 ATGTTAGAGAGTGGTAGTAGTGGACGTGATTCTGGAATGAGTTTAGAAACAGTTAATTCCAATACACAGCGAACTTCATTGAGCAGCGGAACTGAAAGCATCTGCAGTACAAGTTTCAGCCGTCTCTCCTTTGAACTTCTTCCATCATCATCTTCACCGGAGTCTTTCTCCATCAAACCTCACCGTTCATCCGATTTTGCTTACTCCGCCATCCGTAAATCCGGTCTCACTTTCCGTGATTTTCATCTTCTCCGTCGCATAGGCTCCGGTGACATAGGTACAGTTTACCTCTGTCGTCTCCGTGACTCGTCCGTAAACTATCTCGACGATGACGATCCTTCGTTTTACTATGCTATGAAGGTTGTTGATAAAGATGCTGTTGCTCTTAAGAAAAAATCACACAGAGCAGAAATGGAGAGAAAGATTATCAAGATGCTTGATCATCCTTTTCTTCCTAGTTTATATGCAGAGTTTGAAGCTTCTCATTATTCATGCATTGTTATGGAGTATTGCTCCGGTGGAGATTTACACTCTCTCCGTCATCGTCACCACCGTAACCGTTTTTCTCTCTCCTCAGCAAGATTTTACGCGGCGGAGGTACTGGTGGCATTGGAATACTTGCACATGTTAGGAATAATCTACAGAGATCTAAAGCCGGAAAATGTGTTAGTAAGATCAGACGGTCACATCATGTTATCTGATTTTGATCTATCTCTAATCTCTCACGCAATCCCAGCCGTTGAATCATCACCAGAATGTTCTTCTATTTATGATCCACCTGAAGAAGTTTCCTGCACTCGTCCTAATTCCATTCCAACTCCTTTCAAATGTCTCTCACAAGGACTTTTCCGGTCTAAAAAGGTTCAAACATTTCAATCAAACCGGAATCGGCTATTTGTAGCTGAACCGGTTGGAGCAAGATCTTGTTCATTCGTTGGAACACACGAATACGTTTCACCGGAAGTAGCTTCTGGAAACTCTCACGGTAACGCTGTTGATTGGTGGTCGTTTGGAATATTCATCTACGAGATGGTGTACGGTAGAACACCGTTTGCGGGACCATCAAACGAAGCAACGTTGAGGAACATTATTAAAAAGCCACTTAGTTTTCCTACTGCTACGCCTTCTAGTTCGCTTGAAATGCACGCGCGGGATCTTGTTTCGGGTTTGCTTAACAAAGATCCGAACCGGAGACTCGGGTCGAAGCGAGGTGCGGCGGATGTTAAGATGCATCCGTTTTTTTTGGGGCTTAATTTGGCTTTGATACGGATGGTGACACCGCCGGAGGTTCCTGGTTTAAGAAGGCAGAAAACGACGCCGTTGAAGAATGGGAATAAAAGTTCAAGTAAACAATACCCTGCTTCGTCGTTTGATTACTTTTGA 1383 0.4382 MLESGSSGRDSGMSLETVNSNTQRTSLSSGTESICSTSFSRLSFELLPSSSSPESFSIKPHRSSDFAYSAIRKSGLTFRDFHLLRRIGSGDIGTVYLCRLRDSSVNYLDDDDPSFYYAMKVVDKDAVALKKKSHRAEMERKIIKMLDHPFLPSLYAEFEASHYSCIVMEYCSGGDLHSLRHRHHRNRFSLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLISHAIPAVESSPECSSIYDPPEEVSCTRPNSIPTPFKCLSQGLFRSKKVQTFQSNRNRLFVAEPVGARSCSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFIYEMVYGRTPFAGPSNEATLRNIIKKPLSFPTATPSSSLEMHARDLVSGLLNKDPNRRLGSKRGAADVKMHPFFLGLNLALIRMVTPPEVPGLRRQKTTPLKNGNKSSSKQYPASSFDYF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00756 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Trre3g00756 460 Pfam Protein kinase domain 308 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00756 460 Pfam Protein kinase domain 81 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00756 460 FunFam serine/threonine-protein kinase D6PK-like 306 432 - -
Trre3g00756 460 SMART serkin_6 81 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00756 460 SUPERFAMILY Protein kinase-like (PK-like) 52 436 IPR011009 -
Trre3g00756 460 ProSiteProfiles Protein kinase domain profile. 81 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00756 460 FunFam protein kinase PINOID 2 79 170 - -
Trre3g00756 460 MobiDBLite consensus disorder prediction 1 31 - -
Trre3g00756 460 MobiDBLite consensus disorder prediction 431 460 - -
Trre3g00756 460 Gene3D Phosphorylase Kinase; domain 1 79 170 - -
Trre3g00756 460 Gene3D Transferase(Phosphotransferase) domain 1 307 432 - -
Trre3g00756 460 PANTHER FLIPPASE KINASE 1-RELATED 26 436 - -
Trre3g00756 460 MobiDBLite consensus disorder prediction 438 455 - -
Trre3g00756 460 FunFam protein kinase PINOID 171 239 - -
Trre3g00756 460 Gene3D Transferase(Phosphotransferase) domain 1 171 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00756 Trre-Chr3 5255727 5257233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00756 10 460 AGC Kinase Gene Family AT2G34650 65.577 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trre3g00756 Pkinase 1.6e-34 CL0016