Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00725 ATGGCCAAGCATCATGTTGTTTTATTCTTCTTTATATCTTTGGTTTTAGCATCAATAATTTCTTTCATGTGTGATGCAACAAAAAAAGTGATGAAACCAGTAAACTTTACATTTGATATAGAAAATCATTTGGTTCAAAGTTATAAGAGGAGTTTTAATGGTTTTTCTGCCATACTCAATGATCAACAAAGGGAAAAACTTGTTGGCATGAAAGATGTCGTCTCAGTGTTTCCAAGCCAAGAGTATCACATTCAAACCACAAGATCGTGGGACTTCCTTGGTTTACCTCAATCAATCAAAAGAGGTAAAACTGTTGAGAGTGATTTGGTGATTGGAGTCTTAGACACCGGAGTTTGGCCAGAATCTAGAAGTTTTAATGATAAAGGTCTTGGTCCTATTCCAAAAAAGTGGAGGGGAGTTTGTGCAGGCGGTGGTAACTTCAGTTGCAACAATAAGATCATCGGCGCTCGATGGTACCCTGTTAGTGAGGGTGAGAGTGCAAGAGACCATCTTGTCCATGGAACACATGTCGCATCAACATTAGGCGGAAGAAGGATAAATGGTGTGAGCTATTATGGTCTTGCAAAAGGCACCATAAGAGGTGGAGTTCCATCTTCAAGGATTGCTGTATACAAAGTTTGTAACCCAAACTGTCGTGATGATAATATTTTAGCAGCTTTTAATGATGCCATTGCTGATGGAGTTGACATCATTAACATATCCATTGGAAACGAAACTGCTGTTGATTTTCTTAAAGATACTATTGCTATTGGTTCTTTTCATGCCATGGAACAAGGAATACTCACAGTGCATGGAGCAGGCAACTATGGTCCTAACTCAATAAGTATTTTCCGTGGTGGAGATATTGCTTATCCATATGGGGCAATTGCTTCAATTATTAATTTTACATATGATGCTTCTATTATCAGTCATCGACCTTCACTTAACTTGGATTCAAAAGACTTTAATCTTGTTCAATCTTACACTTACTCCACTAAATACCCTGTTGCTGAAATATTGAAGAGTGATGTCGTCCAAGATACCACTGCTCCTAAAATTGCATCTTTCTCTTCTCGTGGTCCAAATCCTATAGTACCAGAAATTATGAAACCAGATATAAGTGCTCCTGGAATCGATATCTTGGCTGCATTTTCACCTATTGCACCAAGCATCGATGGTTATAACGTAAGTGAGAAATACAGTATACACTTTGGTACCTCTATGGCATGTCCCCACGCTGCTGGAGTTGCCGCATATGTCAAATCATTTCATCCAGATTGGTCGCCTGCAGCTATCAAATCTGCCATCATGACCACGGCGAAAACGGTTAATGGTAATTATAATGACATGGTAGGTGAGTTCGCTTATGGATCTGGAAATATCAATCCACAACAAGCTCTTCACCCTGGACTGATTTATGACATTACTAAGCAAGATTATATGCAAATGCTTTCTAAGATTCATAGAACAGTGACAAACGTTGGCTCTCCTAACTCAAGCTACACGGCTACTATCATCCCAATTCCAAAAATCAAGATTGAAGTGGTGCCAAAACTTCTCTCGTTCAAATCCTTACATGAGAAACAATCCTTTGTTGTCATTGTTACCGGAAGAGCAAACTCAAATCAAACTATGTTTTCTTCATCACTTGTTTGGTCAGATGGAACCCACAATGTGAAGAGTCCAATCATTATACAAAGACTCTCTTAA 1710 0.3877 MAKHHVVLFFFISLVLASIISFMCDATKKVMKPVNFTFDIENHLVQSYKRSFNGFSAILNDQQREKLVGMKDVVSVFPSQEYHIQTTRSWDFLGLPQSIKRGKTVESDLVIGVLDTGVWPESRSFNDKGLGPIPKKWRGVCAGGGNFSCNNKIIGARWYPVSEGESARDHLVHGTHVASTLGGRRINGVSYYGLAKGTIRGGVPSSRIAVYKVCNPNCRDDNILAAFNDAIADGVDIINISIGNETAVDFLKDTIAIGSFHAMEQGILTVHGAGNYGPNSISIFRGGDIAYPYGAIASIINFTYDASIISHRPSLNLDSKDFNLVQSYTYSTKYPVAEILKSDVVQDTTAPKIASFSSRGPNPIVPEIMKPDISAPGIDILAAFSPIAPSIDGYNVSEKYSIHFGTSMACPHAAGVAAYVKSFHPDWSPAAIKSAIMTTAKTVNGNYNDMVGEFAYGSGNINPQQALHPGLIYDITKQDYMQMLSKIHRTVTNVGSPNSSYTATIIPIPKIKIEVVPKLLSFKSLHEKQSFVVIVTGRANSNQTMFSSSLVWSDGTHNVKSPIIIQRLS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00725 569 ProSitePatterns Serine proteases, subtilase family, serine active site. 405 415 IPR023828 -
Trre3g00725 569 ProSiteProfiles Serine proteases, subtilase domain profile. 89 467 - -
Trre3g00725 569 Gene3D - 303 346 - -
Trre3g00725 569 Gene3D Peptidase S8/S53 domain 108 282 IPR036852 GO:0004252|GO:0006508
Trre3g00725 569 Gene3D Peptidase S8/S53 domain 347 480 IPR036852 GO:0004252|GO:0006508
Trre3g00725 569 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 282 IPR045051 -
Trre3g00725 569 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 84 IPR037045 -
Trre3g00725 569 PRINTS Subtilisin serine protease family (S8) signature 404 420 IPR015500 -
Trre3g00725 569 PRINTS Subtilisin serine protease family (S8) signature 106 125 IPR015500 -
Trre3g00725 569 PRINTS Subtilisin serine protease family (S8) signature 169 182 IPR015500 -
Trre3g00725 569 CDD Peptidases_S8_3 82 440 IPR034197 -
Trre3g00725 569 ProSitePatterns Serine proteases, subtilase family, histidine active site. 173 183 IPR022398 -
Trre3g00725 569 Pfam Fibronectin type-III domain 485 565 IPR041469 -
Trre3g00725 569 Pfam Peptidase inhibitor I9 41 84 IPR010259 -
Trre3g00725 569 SUPERFAMILY Subtilisin-like 90 471 IPR036852 GO:0004252|GO:0006508
Trre3g00725 569 Pfam Subtilase family 107 458 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00725 Trre-Chr3 5025904 5030688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00725 30 565 Subtilisin-like Serine Gene Family AT5G58820 40.123 4.01e-135 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00725 - - ahf:112755745 526.554