Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00714 ATGGTTGTAGAAGACACCCCCAAATCCATCATCACAGACGATCAAATCCCACCAAACCCTAACAACGAAGAAATCAACAACAACGATCTCGAAGAAGGTGAGATCCTCGATGAAGGAGACGATTCCTCCGCCACTTCCAAACCCAATTCCGCCGCTGTTCATCCTCTCGAGAATTCTTGGACTTTCTGGTTCGATAACCCTCAAACTAGATCCAAACAAGATGCTTGGGGTAGCTCTATTCGACCCGTTTACACTTTCTCCACTGTTGAAGAGTTTTGGAGCATTTACAATAACATTCATCATCCTAGCAAGTTGGCTGATAGAGCTGATTTTCAATGTTTCAAGCATAAGATTGAACCTAAATGGGAGGATCCTATTTGTGCTAATGGTGGAAAATGGACTATGGCGTTTCAAAGGGGAAAATCTGATACCAGTTGGTTATATACGTTGTTGGCAATGATTGGAGAACAATTTGATCATGGAGATGAGATTTGTGGAGCAGTTGTGAATGTCAGGGGTAGGGCTGAGAAAATTTCTATTTGGACTAAGAATGCTGCAAATGAAGCTGCTCAGGTGAGCATTGGAAAACAGTGGAAGGAGTTTCTTGATTATAATGAAACCATTGGCTTTATATTTCATGATGATTGGAAGAAGCTTGACAGAGCTGCTAAAAACAAATATGTTGTATGA 690 0.4116 MVVEDTPKSIITDDQIPPNPNNEEINNNDLEEGEILDEGDDSSATSKPNSAAVHPLENSWTFWFDNPQTRSKQDAWGSSIRPVYTFSTVEEFWSIYNNIHHPSKLADRADFQCFKHKIEPKWEDPICANGGKWTMAFQRGKSDTSWLYTLLAMIGEQFDHGDEICGAVVNVRGRAEKISIWTKNAANEAAQVSIGKQWKEFLDYNETIGFIFHDDWKKLDRAAKNKYVV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00714 229 FunFam Eukaryotic translation initiation factor 4E 45 229 - -
Trre3g00714 229 Pfam Eukaryotic initiation factor 4E 55 207 IPR001040 GO:0003723|GO:0003743|GO:0006413
Trre3g00714 229 Gene3D RNA Cap, Translation Initiation Factor Eif4e 46 229 IPR023398 -
Trre3g00714 229 MobiDBLite consensus disorder prediction 1 52 - -
Trre3g00714 229 SUPERFAMILY eIF4e-like 35 224 IPR023398 -
Trre3g00714 229 MobiDBLite consensus disorder prediction 12 26 - -
Trre3g00714 229 ProSitePatterns Eukaryotic initiation factor 4E signature. 110 133 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Trre3g00714 229 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 39 215 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00714 Trre-Chr3 4941044 4942864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00714 1 229 Eukaryotic Initiation Factors Gene Family AT4G18040 65.702 2.53e-112 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00714 K03259 - gmx:100793288 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00714 3 4941044 4942864 Trre3g00714 3 4941044 4942864 ECH