Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00710 ATGAACAACATCATTTCCGCAACATGCTTGTTCCTCCTCTTCCTTCTTCTTCCATTGTTCTCATGCACCAAAAATACTCAGGTTTATCTAATTGAGTTTGGAGAATACATTAATAGAGAAAAAACATTGCATGAAATAGAGAATACACATCACTCTTACTTGCTTTTGGTAAAAGAAACAGAGGAAGAAGCAAGAGCTTCTCTTCTTTATAGTTACAAACATACTTTCAATGGCTTTGCAGCTTTGCTTACACCTAATGAAGCCAATAATCTTTCAGGAATGGAAGGGGTGGTTTCTGTGAGTAAGAGCCAGACAAAGATCTATTCATTGCATACCACAAGGTCATGGAAATTTGTGGGGTTAGATGGGCCATTAGATCCTTATGAAGAAAAATCCAATGAGACAAATAGTGATTTGTTAGCCAAAGCAAAATATGGGCAAGATATTATCGTAGGAATGATTGATTGTGGTGTATGGCCAGATTCAAAGAGTTTCAGTGATGAAGGGATGGGTCCTATTCCAAAGAAATGGAAAGGAGTGTGCCAAAATGGAACTGATTTTGGTTCATCTAAATGCAATAGAAAGATAATTGGAGCAAGGTACTACTTGCAAGGTTATGAAAGTCTCTATGGTTCTTTAAACGAACAAGAGGATTACAAATCAGCTCGCGACAAAGACGGACACGGAACACACACGGCTTCAATAGTAGCAGGGCGAGCAGTTCATAATGCCTCAGCACTCGGAGGCTTCGCCAGCGGCACAGCTGTTGGCGGAGCCCCATTAGCTCGCCTTGCCATATACAAAGCATGTTGGCCAATTAAAGGAAAACCAAAAAGCGATGGAAATGTTTGCTCAAACATCGACATGCTTAAAGCTATAGATGATGCAATTGAAGATGGTGTTGATGTTTTAAATCTTTCCATTGGGTACCATAGTCCATTGAAATATGAAGATGATGTGATTGCTAGGGGTGCATTACAAGCTATAAGGAATAACATTGTGGTTGTTTGTAGTGCTGGAAATTCTGGTCCTGTTGCTTCTAGTTTGTCAAATCCTGCTCCTTGGATCATCACTGTTGGTGCTAGTACTGTTGATCGAACCTTTCTTGCTCCAATTAAACTTGCCAATGGCACAAACATTGAGGGTAGATCAATTACTCCACTCTATATGGAAAACATTTTACGCCCCTTAGTTCTAGCTAGTGATGTTGAACTTCCAGGCATTACTTCAAATTCTTCCGGGTATTGCCTAGACAATACCCTTGATCCAAGCAAAGTGAAGGGGAAGATAGTTTTGTGTTTGAGAGGACAAGGTGGAAGAGTGAAAAAAGGGTTGGAAGCTCAAAGAGCTGGTGCTATAGGTTTTATCCTTGGGAACAATAAAACTTATGCAAATGATGTACCTTCTGATCCTAATTTCATTCCAGCCACTACAGTGACCTATGAGAATACCTTAAAACTTATTCAATATATTCATTCTACCCCTAATCCAATGGCACAACTTTTGCCTGGAAGAACAGTGTTAGATGCCAAACCAGCACCTTCCATGGCAATTTTCTCTAGCAGAGGTCCAAATATAATTGACCCTAATATTCTAAAGCCTGACATAACAGCTCCTGGAGTAGACATATTGGCAGCATGGACAGCTGAAGATGGACCTACACGAATGACATTTCAGGATAAACGAGTTGTAAAGTACAATATTTTTTCAGGAACTTCAATGTCTTCCCCTCATGTTTCTGCTGCAGCTGTTCTTCTCAAAGCCAGGTACCCTACTTGGAGTCCTGCTGCTATTAGGTCTGCCCTCATGACTTCAGCAAGATCGACAGACAACACAGGCAATCAAATGACAGATGAAACAGGAAAATCTACAACACCATTTGCAATGGGATCAGGCCATTTTAATCCCAAAAGAGCATCAAATCCAGGACTCATTTATGATGCATCTTACAATGACTACCTTCTTTACCTTTGTAATCTTAACTCAACAAACATTGCATATAACTGTCCAAACCAAAATCCTGAACCATTTGATCTAAACTATCCATCTATACAAATCTATAAACTCAATCACACAAAAACTATAAAGAGAACAGTGACCAATGTTGGTAAGAGCAAAAGTGTTTACAAGTTTATTGCTAATCCACCAAAGGAATTTACCATTATAGCCACTCCAAGTGTTCTGAAATTTACACATGTTGGTCAGAAAAGGAATTTTGTCATCACAGTGACAGAGAATAGAGATAAGTTATCAAGTAAAAGTGATTCTGAGAAGTACTATTTTGGATGGTATAGTTGGACTGACAAACATCATGTTGTGAAAAGTCCAGTGGCAGTGTCTTTTCAGTAA 2349 0.3921 MNNIISATCLFLLFLLLPLFSCTKNTQVYLIEFGEYINREKTLHEIENTHHSYLLLVKETEEEARASLLYSYKHTFNGFAALLTPNEANNLSGMEGVVSVSKSQTKIYSLHTTRSWKFVGLDGPLDPYEEKSNETNSDLLAKAKYGQDIIVGMIDCGVWPDSKSFSDEGMGPIPKKWKGVCQNGTDFGSSKCNRKIIGARYYLQGYESLYGSLNEQEDYKSARDKDGHGTHTASIVAGRAVHNASALGGFASGTAVGGAPLARLAIYKACWPIKGKPKSDGNVCSNIDMLKAIDDAIEDGVDVLNLSIGYHSPLKYEDDVIARGALQAIRNNIVVVCSAGNSGPVASSLSNPAPWIITVGASTVDRTFLAPIKLANGTNIEGRSITPLYMENILRPLVLASDVELPGITSNSSGYCLDNTLDPSKVKGKIVLCLRGQGGRVKKGLEAQRAGAIGFILGNNKTYANDVPSDPNFIPATTVTYENTLKLIQYIHSTPNPMAQLLPGRTVLDAKPAPSMAIFSSRGPNIIDPNILKPDITAPGVDILAAWTAEDGPTRMTFQDKRVVKYNIFSGTSMSSPHVSAAAVLLKARYPTWSPAAIRSALMTSARSTDNTGNQMTDETGKSTTPFAMGSGHFNPKRASNPGLIYDASYNDYLLYLCNLNSTNIAYNCPNQNPEPFDLNYPSIQIYKLNHTKTIKRTVTNVGKSKSVYKFIANPPKEFTIIATPSVLKFTHVGQKRNFVITVTENRDKLSSKSDSEKYYFGWYSWTDKHHVVKSPVAVSFQ 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00710 782 CDD Peptidases_S8_3 108 606 IPR034197 -
Trre3g00710 782 Pfam Subtilase family 146 617 IPR000209 GO:0006508|GO:0008236
Trre3g00710 782 CDD PA_subtilisin_like 372 499 - -
Trre3g00710 782 ProSiteProfiles Serine proteases, subtilase domain profile. 115 640 - -
Trre3g00710 782 Pfam PA domain 415 485 IPR003137 -
Trre3g00710 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 571 581 IPR023828 -
Trre3g00710 782 FunFam Subtilisin-like protease SBT1.5 148 419 - -
Trre3g00710 782 Gene3D - 652 781 - -
Trre3g00710 782 FunFam subtilisin-like protease SBT1.5 365 508 - -
Trre3g00710 782 Pfam Fibronectin type-III domain 678 779 IPR041469 -
Trre3g00710 782 Gene3D Peptidase S8/S53 domain 148 651 IPR036852 GO:0004252|GO:0006508
Trre3g00710 782 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Trre3g00710 782 PRINTS Subtilisin serine protease family (S8) signature 570 586 IPR015500 -
Trre3g00710 782 PRINTS Subtilisin serine protease family (S8) signature 146 165 IPR015500 -
Trre3g00710 782 SUPERFAMILY PA domain 423 465 IPR046450 -
Trre3g00710 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 62 779 IPR045051 -
Trre3g00710 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 111 IPR037045 -
Trre3g00710 782 Pfam Peptidase inhibitor I9 28 104 IPR010259 -
Trre3g00710 782 Gene3D - 365 508 - -
Trre3g00710 782 SUPERFAMILY Subtilisin-like 111 644 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00710 Trre-Chr3 4874840 4882016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00710 21 781 Subtilisin-like Serine Gene Family AT5G45650 54.194 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00710 - - gmx:100793064 1205.28