Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00694 ATGAGATCGAGTTGTAATGGGTGTCGCGTACTTCGCAAAGGTTGCAGCGAAAACTGCATCATCAAACCATGCCTTGAGTGGATACGTTGTCCTGAAGCTCAAGGCAATGTCACCCTCTTCCTTGCCAAGTTCTATGGCCGAACTGGTTTGCTCAACCTTCTTACTAACGCTACCAATAAAAATTCCATAGCCGTGTTCAAATCATTGTTGTACGAGGCTGTAGGTAGATTGGTGAATCCCACACATGGGGCCCTCGGCTTATTTTGGACTGCAGAATGGAGCCGATGTGAAAAAGCAGTTGAAGCCGTGTTGACTGGATCAGATATTAACGCTGTTACAATTGTTGATGGACAAACATCATCATGTACAACCATTGCTAAAAAGTGTGTTCTTCCAACAACAACCAATGGTATACGCCACATAGCAAGAGGTACCAACATTGAGATCAGAGAGAAAACTCAATTCAAGAGAGTTGGGTCAACTTTTAAGCCCAAGCCGCAAGTTGGTTTTGTCGATAAGGCTACATTTTTTAAATCAATTTTGGAGAATGGCAGCGTAAAAACTGCAGAGGCTTCGTCGGTAATTGAGACAGAGCCAAATGAAGCTAGTGAAAATCAATTGAACTTGGAACTCACTCTTGGCTTCAATTTCCAATCAAATAATAAGAAGTCAGATGATAATTAA 684 0.4196 MRSSCNGCRVLRKGCSENCIIKPCLEWIRCPEAQGNVTLFLAKFYGRTGLLNLLTNATNKNSIAVFKSLLYEAVGRLVNPTHGALGLFWTAEWSRCEKAVEAVLTGSDINAVTIVDGQTSSCTTIAKKCVLPTTTNGIRHIARGTNIEIREKTQFKRVGSTFKPKPQVGFVDKATFFKSILENGSVKTAEASSVIETEPNEASENQLNLELTLGFNFQSNNKKSDDN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00694 227 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 4 213 - -
Trre3g00694 227 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Trre3g00694 227 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00694 Trre-Chr3 4780822 4781928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00694 1 216 AS2 family AT3G02550 38.053 2.04e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trre3g00694 LOB 7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00694 - - mtr:25485496 297.36