Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00668 ATGATGAAATGGAGTGGTAAAAAACCTTCTTCTTCTTCTTCTTCTAGTGCTTTTTCTTGGCTTTCAAAGTTAAAACATATAAGAATCAATTCTGATTCAAATCATGAAAAAATGAAGAACAAGGAAAAACATATTTCTCCACCTTCATGTTTTGATATTGGTGGAAAATATGGTAACAAAAATGGAAGCAGAAGAAAATCACAAAGTACACTCAAGTTGAAAGAGAAGGATCATATTATTGGTCTAGAAGATGAGAGAAAAATGGTGAATGATAACAATGATTATGATAGAGAAAAGGAATATGAAAACATGAGAAGAAGATTTGAGAGAAAAGCTCAACAAGTTTTGGAAGAACAACTCTTGAAATTAGAAAGAGAAGCAAAAAAAGTTGAAGAAAATTCTATGTTTCAAGATGAATCACCAAGAACAATTTGTACACCAAGAACAACAACAACACATTCTTTTGGTTCTTCTAGACTAAGAAATGTTAGAGAAAATCGTTTTGAGAAAAGTGAAATTGCTTCATCTCAGAGGAAACAGAGTTATGATATGAAGCAGAATGAAGAGTTTAAGAAGATAAAGACTCAAGAAAAACAAAGGAGGAAAATAAAGAAAGTTTCAAGGGTGAAAATATATTCACCAAGAATGGTTTCAAAAGTTGAAATATGCAGAATAAAAGCATTGGAAAAACAAAAGATGAAGAAAGAAATGAAGGAAGAAATTATGGAAGAAATAATTAGTACTAATCCAGAATTAGATAGTTTTGCTGTGATAAAATGTTCATTAAATCCAAAGCAAGATTTTAGAGATTCAATGATTGAAATGATTGAAGAGAAACAGATTAGTAAAGCAGAAGAAATGGAAGAATTGTTGGCATGTTATTTGACTTTGAATGCTGATGAGTATCATGATCTCATAATCAAAGTTTTTAGACAGGTATGGTTTGATATGAGTCAATATGGTTTTGGTGTTAATTCAGAAATGCAATTGGGTTGCTATGAATGA 1005 0.3025 MMKWSGKKPSSSSSSSAFSWLSKLKHIRINSDSNHEKMKNKEKHISPPSCFDIGGKYGNKNGSRRKSQSTLKLKEKDHIIGLEDERKMVNDNNDYDREKEYENMRRRFERKAQQVLEEQLLKLEREAKKVEENSMFQDESPRTICTPRTTTTHSFGSSRLRNVRENRFEKSEIASSQRKQSYDMKQNEEFKKIKTQEKQRRKIKKVSRVKIYSPRMVSKVEICRIKALEKQKMKKEMKEEIMEEIISTNPELDSFAVIKCSLNPKQDFRDSMIEMIEEKQISKAEEMEELLACYLTLNADEYHDLIIKVFRQVWFDMSQYGFGVNSEMQLGCYE 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00668 334 ProSiteProfiles OVATE domain profile. 257 316 IPR006458 -
Trre3g00668 334 MobiDBLite consensus disorder prediction 132 157 - -
Trre3g00668 334 MobiDBLite consensus disorder prediction 32 72 - -
Trre3g00668 334 Pfam Transcriptional repressor, ovate 261 317 IPR006458 -
Trre3g00668 334 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 111 318 IPR038933 GO:0045892
Trre3g00668 334 MobiDBLite consensus disorder prediction 137 157 - -
Trre3g00668 334 Coils Coil 98 133 - -
Trre3g00668 334 MobiDBLite consensus disorder prediction 32 46 - -
Trre3g00668 334 Coils Coil 225 245 - -
Trre3g00668 334 NCBIfam uncharacterized plant-specific domain TIGR01568 256 317 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00668 Trre-Chr3 4595623 4596627 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre3g00668 Ovate 3.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00668 - - cam:101515364 336.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00668 3 4595623 4596627 Trre3g00668 3 4595623 4596627 ECH
Trre7g04750 7 55074471 55075559 Trre3g00668 3 4595623 4596627 PCT