Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00653 ATGAACCATTTGGTTTTTATCACATACCGTCTTTCAATTGCTACCATTTTCGTCGGCTCAATCGGTTACTTTCGAGAAAGAAATAGCAGACCGCCGCTCACATTTCGAATTTTATGCTACCTCTTCTTCAGTGCCATTGTTGGAGCATCAGTTACACAATATTTCTTCCTCCTAGGAATTCAATATACTTCTGCTACATTTGCTTGTGCATTTGTCAACATGGTGCCTGTTATCACTTTCCTATTGGCATTGCCATTTGGATTAGAGACAGTGAACATAAAATGCAACAGTGGAAGAGCAAAGATTCTTGGTACATTGGTGTGTATAGTTGGTGCATTGATGTTAACACTTTACAAAGGAAAGGGTCTGTTTAATTTTTCTCCTCACCATCAGTCTTCAGTGAAGTTAACATCAACTAGGACACCAGAAAAATGGACTATTGGTGTAATAGCTTTGATTTTGGGAACTCTATTTTGGTCTTCTTGGTTCATTTTACAATCTAAAATAAGCAAAAGATATCCATGTCAGTATTCTAGCACAGCAATCATGAGCTTCTTTGGTGCCATTCAATCTGCTGTCATTTGCTTCTTCGTTAACCATGACTTGTCTATATGGGTTCTCAGAGGAAATATACAAATAATTGCAATTTTGTATGCTGGGATAATTGGATCAGGATTGTGTTTTGTTGGTATGTCATGGTGTGTGAAGAAGAGGGGTCCAGTCTTTACTGCAGCATTTAGCCCTTTTGTTCAAATAATGGCTGCCATGATTGATATCCCTGTCTTGCATGAACAGCTCTATCTTGGAAATGTGATGGGATCCATCTTGGTGATGATTGGATTATACATTCTTCTATGGGGTAAGAACAAAGAGATGAAGAATCGTTTGATTAAGTTAGGGGAGGAAGCTGAAAAAAACAACAAGGAACAAGAGCCACAACCTCAAATACAACACTTAACTGTGTCTTGTGAATCAAGGTGTCAATAA 987 0.381 MNHLVFITYRLSIATIFVGSIGYFRERNSRPPLTFRILCYLFFSAIVGASVTQYFFLLGIQYTSATFACAFVNMVPVITFLLALPFGLETVNIKCNSGRAKILGTLVCIVGALMLTLYKGKGLFNFSPHHQSSVKLTSTRTPEKWTIGVIALILGTLFWSSWFILQSKISKRYPCQYSSTAIMSFFGAIQSAVICFFVNHDLSIWVLRGNIQIIAILYAGIIGSGLCFVGMSWCVKKRGPVFTAAFSPFVQIMAAMIDIPVLHEQLYLGNVMGSILVMIGLYILLWGKNKEMKNRLIKLGEEAEKNNKEQEPQPQIQHLTVSCESRCQ 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00653 328 Coils Coil 289 309 - -
Trre3g00653 328 PANTHER WAT1-RELATED PROTEIN 1 302 IPR030184 GO:0016020|GO:0022857
Trre3g00653 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 209 290 - -
Trre3g00653 328 SUPERFAMILY Multidrug resistance efflux transporter EmrE 9 120 - -
Trre3g00653 328 Pfam EamA-like transporter family 1 116 IPR000620 GO:0016020
Trre3g00653 328 Pfam EamA-like transporter family 147 285 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00653 Trre-Chr3 4495028 4497756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00653 9 311 Nodulin-like Gene Family AT1G11450 39.803 5.80e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00653 - - gmx:100803670 536.954