Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00637 ATGGTGACTCCTCGTAAGACAAGGAAGAGAGCTCGTGATTTGGGAACATGGCAGTGTTTGTCGAATGATGGACGGTGGAGATTTAGTTGGTTGTTTGAGTATTTCAAGGAAGGAACAACACACACACAGCTATTCACAGCTATTCACTCTGTGTACAAGAAGATGCAAAACAACGAGAAAGAAAATTTTACAGCTCGAAGATTAAAAATTAGAGACAACAAAAAAGGTTTCATAGAGTTACTTCAACAACTTAGCATTTGTGATTCAATTTCTGAAAACGAATTTGAAGATCGATTTCGAGAGATTGATTCACTTGGAGATGATCATGTTATTTGTGTTATTGAGGATGAGATTTCTGGAAAGATTATTGCAACAGGGAGTGTGTTTATCGAGAAGAAGTTTTTGAGAAATTGTGGTAAAGTTGGACATATCGAAGATGTTGTTGTTGATTCAAGTGTTCGTGGGAAACAATTGGGGAAGAAAGTCATTGATTTTCTTACTCATCATGCTCGTTCTATTGGATGCTATAAGGTTATTCTTGATTGTAGCATTGAGAATAGGGTTTTCTATGAGAAATGTGGTTTTAAGCAGAAAGAAATTCAGATGGCTATGTATTTTGTTTGA 624 0.359 MVTPRKTRKRARDLGTWQCLSNDGRWRFSWLFEYFKEGTTHTQLFTAIHSVYKKMQNNEKENFTARRLKIRDNKKGFIELLQQLSICDSISENEFEDRFREIDSLGDDHVICVIEDEISGKIIATGSVFIEKKFLRNCGKVGHIEDVVVDSSVRGKQLGKKVIDFLTHHARSIGCYKVILDCSIENRVFYEKCGFKQKEIQMAMYFV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00637 207 Pfam Acetyltransferase (GNAT) family 92 195 IPR000182 GO:0016747
Trre3g00637 207 Gene3D - 41 203 - -
Trre3g00637 207 FunFam Glucosamine 6-phosphate N-acetyltransferase 47 203 - -
Trre3g00637 207 PANTHER GLUCOSAMINE 6-PHOSPHATE N-ACETYLTRANSFERASE 54 202 IPR039143 GO:0004343|GO:0006048
Trre3g00637 207 CDD NAT_SF 113 181 - -
Trre3g00637 207 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 68 207 IPR000182 GO:0016747
Trre3g00637 207 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 62 205 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00637 Trre-Chr3 4380678 4383321 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre3g00637 Acetyltransf_1 4.2e-16 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00637 K00621 - gmx:100499668 248.825