Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00633 ATGGAGAAATCTGGACCGTTCGCATTTGAAACAGAATCAGGAACATCATGGGTAGCTGATCTGAAAGAACCATCATCAGCATCAGTTGTAATGTTTGAGAAACCTTTGATGAACATTACATTTGTTGATCTTATGAATGCCACGTCATACTTTGGAAAAGATTCTCAGTTAGCTGAAGGTAGATGTGGGCCCGTTTATCGTGCTGTTTTACCAGGAGAGTTACACGTGGCAATCAAGGTTCTTGAGAATGCTAGAGACGTTGATCATGATGAAGCTGTTGATACTTTCGTTGACTTGTCTCAGCTTAAACATCCCAATCTTTTGCCTCTCTCTGGTTACTGCATTGCAGGGAAGGAGAAGCTAGTGTTGTACGAGTTTATGTCAAACGGAGACTTAGGCAGGTGGCTACACGAACTACCAACGGGTCAAACTAACGTAGAGGATTGGAGTGACGACACATGGGAGATTCAAAACGGTGTCGGTTCACAAACCCCCTCGCCAGAAAAAATGGGTTGGCCAACACGACACCGTATCGCTATAGGAGTAGCGCGTGGTCTAGCTTTTCTCCACCATGCAGGATCAAAGCCTGTCGTTCACGGCCATTTGGTAACATCAAATGTCCTACTTGCTGATGATTTCGAGCCTCGAATTGCTGATTTTGGGTTCCGAAAATTCGGGCAACAATGTCCTCCGAATTGCAGCACCGAAACAGATGTTTATTGCTTTGGTGCGGTGCTTATGGAGCTTTTAACGGGGAAGCCCGGTACTGCAGAGACAGTTGTTTGGGTGAGGAAACTTGTAAGAGAAGGACATGGAGTGAGGGCAATTGATGAAAGGATGAAACTCGACAGTGGTGACTCAGAGAGTCAAATGGTGGAGAGTCTCCGAGTTGCGTATTTATGCACTGCTGAGTCACCTGGGAAGAGGCCTACTATGCAACAAGTTTTAGGGCTTCTCAAAGATATTCATCCAAGAGCTGCACTTAGATTGAGTTGA 996 0.4548 MEKSGPFAFETESGTSWVADLKEPSSASVVMFEKPLMNITFVDLMNATSYFGKDSQLAEGRCGPVYRAVLPGELHVAIKVLENARDVDHDEAVDTFVDLSQLKHPNLLPLSGYCIAGKEKLVLYEFMSNGDLGRWLHELPTGQTNVEDWSDDTWEIQNGVGSQTPSPEKMGWPTRHRIAIGVARGLAFLHHAGSKPVVHGHLVTSNVLLADDFEPRIADFGFRKFGQQCPPNCSTETDVYCFGAVLMELLTGKPGTAETVVWVRKLVREGHGVRAIDERMKLDSGDSESQMVESLRVAYLCTAESPGKRPTMQQVLGLLKDIHPRAALRLS 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00633 331 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 34 322 - -
Trre3g00633 331 Gene3D Transferase(Phosphotransferase) domain 1 127 228 - -
Trre3g00633 331 Gene3D Phosphorylase Kinase; domain 1 11 126 - -
Trre3g00633 331 Gene3D Transferase(Phosphotransferase) domain 1 229 327 - -
Trre3g00633 331 SUPERFAMILY Protein kinase-like (PK-like) 28 319 IPR011009 -
Trre3g00633 331 FunFam Putative LRR receptor-like serine/threonine-protein kinase 12 126 - -
Trre3g00633 331 Pfam Protein tyrosine and serine/threonine kinase 54 316 IPR001245 GO:0004672|GO:0006468
Trre3g00633 331 ProSiteProfiles Protein kinase domain profile. 51 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00633 Trre-Chr3 4352408 4354882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00633 22 322 Receptor kinase-like Gene Family AT5G07280 36.556 3.36e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Trre3g00633 PK_Tyr_Ser-Thr 1.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00633 - - gmx:100778920 568.155