Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00613 ATGGCTTCCTCCAATCAAAACTTCATCTACATCGCCAAACTCGCCGAACAAGCCGAACGCTACGAAGAAATGGTTGATGCGATGAAGAATGTTGCTAAGCTTGATGTTGAATTGACTGTTGAAGAGAGAAATCTGTTGTCTGTTGCTTATAAGAATGTTGTTGGAGCACGTAGGGCTTCTTGGAGGATTCTTTCCTCGATTGAACAAAAAGAAGAAGGGAAAGGGAATGAGGCGAATGTGAATCGGATTAAAGAGTATAGGAAAAAGGTTGAATCTGAGTTATCTGATATTTGTACTGATATCATGACTGTTATTGATACTCATCTCATTCCTCATTCATCTGGTGAATCTAATGTCTTTTACTACAAAATGAAAGGTGACTATTACAGATATCTGGCTGAGTTTAAGAATGGGGATGACAGGAAAGAGGCTGCTGATCAGTCACTGAAAGCATATCAGGAAGCTTCTACTGCTGCAGAGACTGAGTTACCTCCCACACATCCCGTCAGACTGGGTTTGGCTTTGAACTTCTCTGTCTTCTATTATGAAATCTTGAACTCTCCAGAAAGGGCTTGTCACCTTGCCAAGCAGGCATTTGATGTAGCAATCTCTGAGTTAGATTCCCTCAATGAGGAATCTTACAAAGACAGCACACTGATCATGCAGCTTTTGAGGGACAACCTCACATTGTGGACTTCTGACATTCCTGAGGATGGAGCTGATGAACAAAAGCCGGAGTCTGCTCGAGCCCCCGCAGGAGATAACGCAGAGTAA 774 0.4276 MASSNQNFIYIAKLAEQAERYEEMVDAMKNVAKLDVELTVEERNLLSVAYKNVVGARRASWRILSSIEQKEEGKGNEANVNRIKEYRKKVESELSDICTDIMTVIDTHLIPHSSGESNVFYYKMKGDYYRYLAEFKNGDDRKEAADQSLKAYQEASTAAETELPPTHPVRLGLALNFSVFYYEILNSPERACHLAKQAFDVAISELDSLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGADEQKPESARAPAGDNAE 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00613 257 PANTHER 14-3-3 PROTEIN 6 235 IPR000308 -
Trre3g00613 257 Coils Coil 11 31 - -
Trre3g00613 257 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Trre3g00613 257 PRINTS 14-3-3 protein zeta signature 178 204 IPR000308 -
Trre3g00613 257 PRINTS 14-3-3 protein zeta signature 151 177 IPR000308 -
Trre3g00613 257 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Trre3g00613 257 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Trre3g00613 257 PRINTS 14-3-3 protein zeta signature 205 234 IPR000308 -
Trre3g00613 257 PRINTS 14-3-3 protein zeta signature 116 138 IPR000308 -
Trre3g00613 257 SUPERFAMILY 14-3-3 protein 6 234 IPR036815 -
Trre3g00613 257 PIRSF 14-3-3 1 244 IPR000308 -
Trre3g00613 257 Gene3D - 1 245 IPR036815 -
Trre3g00613 257 MobiDBLite consensus disorder prediction 234 257 - -
Trre3g00613 257 ProSitePatterns 14-3-3 proteins signature 2. 214 233 IPR023409 -
Trre3g00613 257 Pfam 14-3-3 protein 12 232 IPR023410 -
Trre3g00613 257 SMART 1433_4 5 245 IPR023410 -
Trre3g00613 257 FunFam 14-3-3 protein epsilon 1 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00613 Trre-Chr3 4180034 4182984 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00613 8 257 14-3-3 family AT2G42590 76.378 2.06e-143 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00613 K06630 - gmx:100807980 429.869