Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00610 ATGGCTTCCTCCAATCAAAACTTCATCTACATCGCCAAACTCGCCGAACAAGCCGAACGCTACGAAGAAATGGTTGATGCGATGAAGAATGTTGCTAAGCTTGATGTTGAATTGACTGTTGAAGAGAGAAATCTGTTGTCTGTTGCTTACAAGAATGTTGTTGGAGCACGTAGGGCTTCTTGGAGGATTCTTTCCTCAATTGAACAAAAAGAAGAAGGGAAAGGGAATGAGGCGAATGTGAATCGGATTAAAGAGTATAGGAAAAAGATCATGTGTATCTCAAATCCCAAATAA 294 0.4048 MASSNQNFIYIAKLAEQAERYEEMVDAMKNVAKLDVELTVEERNLLSVAYKNVVGARRASWRILSSIEQKEEGKGNEANVNRIKEYRKKIMCISNPK 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00610 97 SMART 1433_4 5 95 IPR023410 -
Trre3g00610 97 Pfam 14-3-3 protein 12 90 IPR023410 -
Trre3g00610 97 Gene3D - 1 92 IPR036815 -
Trre3g00610 97 Coils Coil 11 31 - -
Trre3g00610 97 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Trre3g00610 97 SUPERFAMILY 14-3-3 protein 5 90 IPR036815 -
Trre3g00610 97 PANTHER 14-3-3 PROTEIN 6 90 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00610 Trre-Chr3 4165764 4166153 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00610 9 90 14-3-3 family AT1G34760 79.268 5.90e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00610 K06630 - atri:130806328 154.066