Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00569 ATGAAGAACTCTATTAAGCACTTACTATTTTCTTTTATGATAATAATTTCCATTCTTTGTTTGCTATGTTTCACAACAAAAGTTGAAGCTTTAAGCAAAAATGTCTCTGGCTTTTATGTGTTTGGAGATTCCACAGTAGACCCCGGAAACAATAACTATATAAACACACTTTTCAAAAGCAATTTTCCACCATATGGCAAAGATTTCCCAAACAATGTTCCTACAGGAAGATTCTGCAATGGAAAATTATCCACTGATTTCATTGCTTCATATGTAGGTGTGAAAAAAGAGCTTCTTCCAGCTTATTTGGACCCAAATGTTATCACAAATGTTGAAGAGCTTATGTCAGGAGTTAGTTTTGCTTCTGCTGGTTCCGGTTATGACCCTCTTACACCAACCATTTCTAGTGTAATTCCAATACCAAAGCAGGTGGAGTATTTCAAAGAATGCAAAATAAAGCTAGAAAGTGTGCTTGGTAAACAAGGAACTGAAAATCATATTAAGAAGGCTGTGTTTTTCATCAGTGCTGGTACCAATGATTTTGCTCTTAATTATTTTACTCTGCCAGTAAGAAGAAAAAGCTTTACTCTCTTAGGATACCAGCAATTCTTGATCCAACATGTGAAAGAATTTATACAGGGTTTGTTGGCTGAAGGAGCTCAAAGAATTGCAATAACTGGAGTACCTCCAATAGGATGCCTACCCGTCATGATTTCCTTGAATTCCCCTAATGCATTTTTGCAACGTGATTGTATACAACAATTTTCCTCCACATCTAGAGACTACAATCTTCTCCTTCAACGTGAATTACAAGCATTGCAATTGCAGCTTAAATCATCTAATTCAAATGCTAAGATCTATTACATTGACATATATGGACCACTAGCCAATATGATTCAATCACATCAAAAATATGGATTTGAAGAAATTGATAGTGGATGTTGTGGAAGTGGATACATTGAAGCAACAATTTTGTGCAATAAGTTTTCAAATTTGTGCCCTGACCCATCTAAGTTTGTGTTTTGGGATTCAATTCATCCCACAGAGAAAGCATACCACAATCTCTTCTTGGCTTTCCAATCCACCATTGATTTCATCGCCAACAACTAG 1110 0.3586 MKNSIKHLLFSFMIIISILCLLCFTTKVEALSKNVSGFYVFGDSTVDPGNNNYINTLFKSNFPPYGKDFPNNVPTGRFCNGKLSTDFIASYVGVKKELLPAYLDPNVITNVEELMSGVSFASAGSGYDPLTPTISSVIPIPKQVEYFKECKIKLESVLGKQGTENHIKKAVFFISAGTNDFALNYFTLPVRRKSFTLLGYQQFLIQHVKEFIQGLLAEGAQRIAITGVPPIGCLPVMISLNSPNAFLQRDCIQQFSSTSRDYNLLLQRELQALQLQLKSSNSNAKIYYIDIYGPLANMIQSHQKYGFEEIDSGCCGSGYIEATILCNKFSNLCPDPSKFVFWDSIHPTEKAYHNLFLAFQSTIDFIANN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00569 369 Coils Coil 263 283 - -
Trre3g00569 369 PANTHER GDSL ESTERASE/LIPASE EXL3 19 355 - -
Trre3g00569 369 SUPERFAMILY SGNH hydrolase 170 360 - -
Trre3g00569 369 Pfam GDSL-like Lipase/Acylhydrolase 39 357 IPR001087 GO:0016788
Trre3g00569 369 Gene3D SGNH hydrolase 25 365 IPR036514 -
Trre3g00569 369 CDD SGNH_plant_lipase_like 38 359 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00569 Trre-Chr3 3874681 3881602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00569 28 355 Pollen Coat Proteome AT1G75910 33.234 2.41e-55 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00569 - - gmx:100788326 544.273