Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00551 ATGAAGAAGATTTCTAAGGGCAGCTGCAAGACAGCATCACACAGGCTCTTCAGGGACAAGGCAAAGAACCATGTTGATGATCTACAGGTGATGTTTCTTGATCTGCAGTTTGCCAGGAAGGAGAGTCTTTCCATTGATGCCACACTTCTCGAGGAGCAAGTCCATCAGATGCTTCGGGAGTGGAGGGCCGATCTAAATGAGCCCTCTTCTGCTGCTTCCTCAAAGCAGTTAAGCTCAGAACAATCCTCCTTAATGTCAACCTGCAGACTGAAATGTGAATTTGTGATGGACACATGTAATCTTGATTTGAGTTTGATGTTTATGGTTTACTATAGGGTGGAAGTCATGGATCATACCTACCTATCTACCAAGTCTCTGCCCTCCTCCTTCTGCTTTCTTGTTGAGAACCTGATGCCAAGGCTGACATAG 429 0.4545 MKKISKGSCKTASHRLFRDKAKNHVDDLQVMFLDLQFARKESLSIDATLLEEQVHQMLREWRADLNEPSSAASSKQLSSEQSSLMSTCRLKCEFVMDTCNLDLSLMFMVYYRVEVMDHTYLSTKSLPSSFCFLVENLMPRLT 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00551 142 Coils Coil 40 60 - -
Trre3g00551 142 PANTHER TRANSCRIPTION FACTOR VOZ1 1 90 IPR039277 GO:0006355|GO:0048578
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00551 Trre-Chr3 3760364 3760792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00551 3 90 VOZ-9 Transcription Factor Family AT1G28520 63.636 2.73e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00551 - - gmx:100784593 125.561