Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00521 ATGAGTCTTGGAGAGCATATTGCTTATGACACAATTATGATATTTCTATCAATATCTTTGATTATTCTTGGTGTAATACTCTATTTGGCTTGCAAGAAGAAACCTGTTGAATCAGAAGAAACACTTTCAGTGAAACACAGTGCTCATGCATACCCTTTAACAGAAATTGATGTTGCTACAAATGGCTTCAACCATAGAAGAATCATTGGAAAGGGTCGTTTAGGAACAGTTTATGCAGGAAAACTAGAAAATGAAGAGCTTGTAGCTGTCAAACGCATTCACCCGGTTCTTGTATTAAGCAACGCGGGATTTGGATTCTCTTCAGTGATGAAATGGCTCTCTTTAGCTCAACACCCTAACGTCGTTCCCATAATTGGATTCTCAGAAGCGCCAGGTGAAAGAGTTATAGTGATGGAGTTTGTTCGAATGGCAAATTTGGAATTTTACTTGCATGAAAATCATGATGGAGGCTCTTCTTCACTTTTGGATTGGAACAAGAGGTTTATGATTGCAGCTGGAGTAGCTAAAGGGCTACAATATCTACATGAAGTGGTAGCACCAAATATTGTACATGGTTGTGTTAAGTCATCTAATGTTCTTATTGATGTTAATTTTTGTGCTAAGATATCTGATTATGGACTTAATTTTTTGGGGGGTGTAGAAAAAAGAGGGTTAATTGGTTATGTTGATGATGAATATTGGAATGAAGGATTAAGGGGTGGTAGTGTTTGCAAGGAAAGTGATATTTATAGTTTAGGAGTTGTTTTGTTGGAGCTTTTAAGTGGAAGAGGATGTGAGGGTGGATTATTGGTGAAATGGGCTTTGCCTTTGATTAAGGATATGAGATATAGTGAAGTTTTGGATCCAAAGTTGATGATTCCTTCTAATATGAAGGCAATTGTTAGATTAGCAAAAGTTGCTTTAGCTTGTGTTGGTAATTCAAGAAAATGTAGGCCCTGTATAAATCATGTGGCTACCATTTTGAATGATTTAGAGACAGAAGTGTGCCTCTTATCAAGTTGA 1023 0.3675 MSLGEHIAYDTIMIFLSISLIILGVILYLACKKKPVESEETLSVKHSAHAYPLTEIDVATNGFNHRRIIGKGRLGTVYAGKLENEELVAVKRIHPVLVLSNAGFGFSSVMKWLSLAQHPNVVPIIGFSEAPGERVIVMEFVRMANLEFYLHENHDGGSSSLLDWNKRFMIAAGVAKGLQYLHEVVAPNIVHGCVKSSNVLIDVNFCAKISDYGLNFLGGVEKRGLIGYVDDEYWNEGLRGGSVCKESDIYSLGVVLLELLSGRGCEGGLLVKWALPLIKDMRYSEVLDPKLMIPSNMKAIVRLAKVALACVGNSRKCRPCINHVATILNDLETEVCLLSS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00521 340 Gene3D Transferase(Phosphotransferase) domain 1 143 336 - -
Trre3g00521 340 SUPERFAMILY Protein kinase-like (PK-like) 38 327 IPR011009 -
Trre3g00521 340 ProSiteProfiles Protein kinase domain profile. 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00521 340 FunFam serine/threonine-protein kinase-like protein ACR4 30 140 - -
Trre3g00521 340 FunFam Receptor protein kinase CRINKLY4 142 335 - -
Trre3g00521 340 Gene3D Phosphorylase Kinase; domain 1 27 140 - -
Trre3g00521 340 PANTHER OS01G0253100 PROTEIN 47 331 - -
Trre3g00521 340 Pfam Protein tyrosine and serine/threonine kinase 66 326 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00521 Trre-Chr3 3531883 3533079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00521 40 328 Receptor kinase-like Gene Family AT3G59420 36.093 1.78e-50 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre3g00521 PK_Tyr_Ser-Thr 4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00521 - - mtr:11441273 596.275