Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00509 ATGGAAGGCAGAAAAGTGAATATAATTGCTGCTACATCAGTGATTACACTGATAATTATCATAATCATTGCCCGTGTCTTGTGGAAACTCTCAAATGTTTTCTTCCTCATATGTGGTGCTGGTGTTGCAGTGATCCTTGCAATCATTGCTTTTGCATTTCTTAGCTTACGCCACAAACGCAGAACAAGAATATTGGAATCAGAGTTAAAATCAGAAAGTCAAGAGCTTCGAATAGATTACAGTTTCTTAAGAAAAGTTGCAGGGGTTCCAACAAAATTCAAATACAAGGAGCTTGAAGAAGCAACAGATGGGTTTCAATCACTTATTGGAAGAGGTTCTTCAGCTTCTGTTTTCAAAGGAATTCTAAATGATGGAACTTCGGTCGCTGTGAAAAGAATTGATGCAGAAGAAAGAGGAGAAAGAGAGTTCAAATCAGAAGTTGCAGCTATAGCTAATGTTCAACATGTGAATCTTGTGAGACTTTTCGGGTATTGTAATTCTTCTAAAGCTCCTAGGTATCTTGTTTATGATTTTATCTCAAATGGGTCATTGGATTGTTGGATTTTTCCCAAAAGGGAATCTCAAAGGCGTCCGCGTCGCAGCGGATGCTTATCGTGGAATTTGAGGTATAAAGTTGCAATTGATGTTGCTAAAGGACTAGCATATCTTCACCACGATTGTAGATCAAGAATCTTACACCTTGATATAAAGCCGGAAAATATACTCTTGGATGAGTGCTTTAGAGCACTTGTTTCCGACTTCGGTCTCTCAAAACTTACCGGTAAAGACGAAAGCCAGTCGGTGTCTGCAATAAGAGGAACAAGAGGGTATATGGCACCTGAATGGCTTTTAGAAAAGGGTATTTCAGATAAAACCGATGTATTTAGTTATGGAATGGTTTTATTGGAGATTGTTGGAGGAAGAAAAAATGTATGTTTAATTGAAGATGAAAAGGACAAGTCAAAAAGGAAATGGCAATATTTTCCAAAGATTGTAAATGAGAAAGTGAAACAAGGGAAAATGATGGAAATTGTTGATCATAGGTTAATGGAATGTGGGGGTGTTGATGAGGTGGAGGTGTATAGATTGGTTTATACTGCTTTATGGTGTGTACAAGAGAAGCCAAGGTTAAGGCCTAGTATGGCTAGAGTGGTTGATATGCTTGAAGGGCGTGTGAAAGTGGAGGAGCCACCTACTAGTAGTAAAATGATTCTTGTTGATTTTCTTTCTGTTGATGATGATAATGATGTTACAGATAGTAATAACATTAACATGCCAAGGTTGGAAACTATATCTAGTCAAGGAACACAAAGCAATGTGGAATGTAATTCTACCTACTCTTTTACTACTACTGTTTTTTCTGGAAGATAG 1371 0.3756 MEGRKVNIIAATSVITLIIIIIIARVLWKLSNVFFLICGAGVAVILAIIAFAFLSLRHKRRTRILESELKSESQELRIDYSFLRKVAGVPTKFKYKELEEATDGFQSLIGRGSSASVFKGILNDGTSVAVKRIDAEERGEREFKSEVAAIANVQHVNLVRLFGYCNSSKAPRYLVYDFISNGSLDCWIFPKRESQRRPRRSGCLSWNLRYKVAIDVAKGLAYLHHDCRSRILHLDIKPENILLDECFRALVSDFGLSKLTGKDESQSVSAIRGTRGYMAPEWLLEKGISDKTDVFSYGMVLLEIVGGRKNVCLIEDEKDKSKRKWQYFPKIVNEKVKQGKMMEIVDHRLMECGGVDEVEVYRLVYTALWCVQEKPRLRPSMARVVDMLEGRVKVEEPPTSSKMILVDFLSVDDDNDVTDSNNINMPRLETISSQGTQSNVECNSTYSFTTTVFSGR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00509 456 FunFam Putative receptor-like protein kinase 179 396 - -
Trre3g00509 456 SUPERFAMILY Protein kinase-like (PK-like) 85 389 IPR011009 -
Trre3g00509 456 SMART serkin_6 103 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00509 456 Gene3D Phosphorylase Kinase; domain 1 66 178 - -
Trre3g00509 456 FunFam Putative receptor-like protein kinase 70 178 - -
Trre3g00509 456 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Trre3g00509 456 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 39 400 - -
Trre3g00509 456 ProSiteProfiles Protein kinase domain profile. 103 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00509 456 Gene3D Transferase(Phosphotransferase) domain 1 179 405 - -
Trre3g00509 456 Pfam Protein kinase domain 107 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00509 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00509 Trre-Chr3 3411242 3412612 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00509 1 429 Receptor kinase-like Gene Family AT5G20050 59.629 7.48e-172 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre3g00509 Pkinase 2.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00509 - - gmx:100791152 632.484