Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00508 ATGGAAGGCAGAAAAGTGAATATAATTGCTGCTACATCAGTGATTACACTGATAATTATCATAATCATTGCCCGTGTCTTGTGGAAACTCTCAAATGTTTTCTTCCTCATATGTGGTGCTGGTGTTGCAGTGATCCTTGCAATCATTGCTTTTGCATTTCTTAGCTTACGCCACAAACGCAGAACAAGAATATTGGAATCAGAGTTAAAATCAGAAAGTCAAGAGCTTCGAATAGATTACAGTTTCTTAAGAAAAGTTGCAGGGGTTCCAACAAAATTCAAATACAAGGAGCTTGAAGAAGCAACAGATGGGTTTCAATCACTTATTGGAAGAGGTTCTTCAGCTTCTGTTTTCAAAGGAATTCTAAATGATGGAACTTCGGTCGCTGTGAAAAGAATTGATGCAGAAGAAAGAGGAGAAAGAGAGTTCAAATCAGAAGTTGCAGCTATAGCTAATGTTCAACATGTGAATCTTGTGAGACTTTTCGGGTTAATGGAATGTGGGGGTGTTGATGAGGTGGAGGTGTATAGATTGGTTTATACTGCTTTATGGTGTGTACAAGAGAAGCCAAGGTTAAGGCCTAGTATGGCTAGAGTGGTTGATATGCTTGAAGGGCGTGTGAAAGTGGAGGAGCCACCTACTAGTAGTAAAATGATTCTTGTTGATTTTCTTTCTGTTGATGATGATAATGATGTTACAGATAGTAATAACATTAACATGCCAAGGTTGGAAACTATATCTAGTCAAGGAACACAAAGCAATGTGGAATGTAATTCTACCTACTCTTTTACTACTACTGTTTTTTCTGGAAGATAG 816 0.3787 MEGRKVNIIAATSVITLIIIIIIARVLWKLSNVFFLICGAGVAVILAIIAFAFLSLRHKRRTRILESELKSESQELRIDYSFLRKVAGVPTKFKYKELEEATDGFQSLIGRGSSASVFKGILNDGTSVAVKRIDAEERGEREFKSEVAAIANVQHVNLVRLFGLMECGGVDEVEVYRLVYTALWCVQEKPRLRPSMARVVDMLEGRVKVEEPPTSSKMILVDFLSVDDDNDVTDSNNINMPRLETISSQGTQSNVECNSTYSFTTTVFSGR 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00508 271 FunFam Putative receptor-like protein kinase 70 180 - -
Trre3g00508 271 Pfam Protein kinase domain 107 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00508 271 SUPERFAMILY Protein kinase-like (PK-like) 85 169 IPR011009 -
Trre3g00508 271 PANTHER OS07G0415500 PROTEIN 170 214 - -
Trre3g00508 271 Gene3D Phosphorylase Kinase; domain 1 64 180 - -
Trre3g00508 271 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00508 Trre-Chr3 3411242 3412612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00508 177 215 Receptor kinase-like Gene Family AT5G20050 61.538 4.40e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Trre3g00508 Pkinase 4.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00508 - - gmx:100791152 209.149