Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00476 ATGTCATATAATTGGGCCTCTAATTCCACCAATCAGAAAGTTCCCCCAAGTCTTACCATTATTCTCTTTCTCTTCCTCTTTTTCTCTCTCTATCTCGTCCTCCTTCTCACTCTCAGCTTTTCTCTTTCTCTCTCACTCTCACTCTCACGCTGCTTTCGACTCTCTCTGCCCTCCCCATCCCATCCTTCACCGCCACAACCACTATCACCACCACCAGAACCGCAATCTTCTTCTTCTCAGCCGATCCAGAGCAGTAGCAAAAGTGTAGTGTTGCTTCGCGGCGGGATGGTGATGTTCTGTCGTGCAAAACGGCGAGAAAAGATGATCTTTCTTCATGTTCAACAATACTGCATAAATTGTGGAGTTTGTATGGGAGAGTACTTTTGTGGTACATGCAAATTCTTTGATGATGATCAAAGAAGGAAGGAGATAAATGATTACTTCAAATTATTAATGATCCCAATAGAACTAATGCTTTGTTTTGAAACACAGTTTCAGACTTTGCTTTGTGGACTAATTGGCCTGCCTCCTTCAAATGTAGTTTTGCCTCAATCCCCTATGCACACCAAGAGTCTATGTGTTTATCTTCAATGA 594 0.4242 MSYNWASNSTNQKVPPSLTIILFLFLFFSLYLVLLLTLSFSLSLSLSLSRCFRLSLPSPSHPSPPQPLSPPPEPQSSSSQPIQSSSKSVVLLRGGMVMFCRAKRREKMIFLHVQQYCINCGVCMGEYFCGTCKFFDDDQRRKEINDYFKLLMIPIELMLCFETQFQTLLCGLIGLPPSNVVLPQSPMHTKSLCVYLQ 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00476 197 MobiDBLite consensus disorder prediction 61 87 - -
Trre3g00476 197 MobiDBLite consensus disorder prediction 61 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00476 Trre-Chr3 3175685 3177605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00476 165 194 Antiporters AT1G15460 83.333 3.19e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00476 K10144 K24194 egr:104437739 61.6178