Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00434 ATGGCTCCTGAAGTGATCAAAATCGGTAGAGCTTCGACTCATACCGATGTTTACATGTTCGGTATCTTGATTTTAGAGGTTATGTGTGGAAGGAGACCATTAGAAGAAGGTAAGGAACCTTTGGTTGAGTTTGTTTGGAAATTTATGGTACAAGGGGAACTTGTGGGTGCACTTGATGAGAGGTTAAGGGCTAAAGGTGAATTAAGTTTGCAAGAAATGGAGAGAGTGTTACACTTAGGTTTGTTGTGTGCATATCCAGAACCAAAATCTAGGCCAACAATGAGACAAGTTGTGAATATTTTAGAAGGGAAGAATGAGGGAGTTGAAGAGTCAGAGATTGAGAATATGGATAGTTATTTGCTTCAACAGTTAAAATCAAGGGATATATTGGCTGAATATTCTCATTATTTTAGCTATGCATCACACCCAACTTTTCAAGATATTCGTTAA 450 0.3778 MAPEVIKIGRASTHTDVYMFGILILEVMCGRRPLEEGKEPLVEFVWKFMVQGELVGALDERLRAKGELSLQEMERVLHLGLLCAYPEPKSRPTMRQVVNILEGKNEGVEESEIENMDSYLLQQLKSRDILAEYSHYFSYASHPTFQDIR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00434 149 Pfam Protein tyrosine and serine/threonine kinase 1 101 IPR001245 GO:0004672|GO:0006468
Trre3g00434 149 Gene3D Transferase(Phosphotransferase) domain 1 1 121 - -
Trre3g00434 149 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00434 149 SUPERFAMILY Protein kinase-like (PK-like) 1 103 IPR011009 -
Trre3g00434 149 PANTHER - 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00434 Trre-Chr3 2890619 2891068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00434 1 120 Receptor kinase-like Gene Family AT5G55830 40.945 3.62e-26 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre3g00434 PK_Tyr_Ser-Thr 5.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00434 - - gmx:100804391 254.603