Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00382 ATGCAAACTAGGTATATGGAGAGATCGAATAGTATGGCGAGAGAGAAACGAAGCTTAGATTCAACTGCTAATCAAGAAGATCAACCTGAAAGGAAACGACCAGCTTTAGCTAGTGTAATTGTTGAGGCCCTGAAGGTGGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGAAGAGTTGTTAGCGAAGAAGTGGAGCGCGCTTTAGCAAAATTAGGCCCTGCCAATCTTAGTGAGAGATCTAGATCTTCTCCGAAGCGCATAGAAAGCCCTGATGGAGGAAATTTACAGTTACAATTTAGGACCAGGTTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGGGAGCAGGGCACTGCCATTCATATTGTCTTGATTGATTCAAACACAGGCCATGTTGTCACGTCCGGCCCAGCGTCATGTGTCAAACTAGATGTTATTGTACTTGAAGGGGATTTCAATAATGAGGATGATGATACTTGGAGTCAAGAAGAATTTGAGAGCCATGTTGTGAAAGAGCGAGAAGGAAAACGACCTCTTCTGACTGGTGGTGATCTGCAAGTGACACTGAAGGAGGGTGTAGGAACACTGGCTGATCTTACATTTACAGACAACTCTAGCTGGATAAGAAGTCGGAAGTTCAGGCTGGGGTTAAAAGTTTCCTCAGGTTTTTGTGAGGGAATGCGTATTCGCGAAGCCAAAACAGAGGCTTTCACTGTTAAGGATCACCGTGGAGAATTATACAAGAAACATTATCCACCTGCCTTGACTGATGAGGTCTGGAGATTGGAGAAGATTGGTAAGGATGGATCCTTTCACAAAAGGCTAACTAAAGCAGGCATATGTTCCGTTGAAGATGTCCTTCAACTTGTGGTTAGAGACCCACAGAGATTGCGGAATATTCTTGGGAGTGGCATGTCAAATAAAATGTGGGAGGTTCTTGTTGAACATGCAAAGACATGTGTCCTCAGTGGAAAACTCTATGTATACTATCCTGATGATGCAAGGAATGTTGGTGTTGTTTTCAATAATATCTACGAGTTGAGTGGCTTAATCACCAATGACCAATATTACTCTGCTGATTCTCTCTCTGATAATCAAAAGGTTTATGTGGACACATTGGTGAAGAAGGCATATGAGAATTGGATGCATGTTGTTGAGTATGATGGTAAATCTCTGTTAAACTACAATCAGAATAGGACTCTGGGTACGTCCCAGCATCAGGTTCCAGTGGGTTCCCACGATTATTCTGTTTCAAACCCACTCGATCAGCAGATCTCTATCCCAAGTCTACCAGTTCATGTACCTACAGGACAACCTTCAATGGATCCAGGTGTAGCAGTTGGAGGTTATCACCATGGTACAACTACCAGATTCTCAATGCAACCACAGAACACTGATCTTTATTCTGCTCTTCAGTTTGGTAATACTGCATTCCCTCTACAAAACCTGTTGATGAGTGATTCACACCAATCTCAACTTCCAAGCAATGAAAATGAGTTGTCACTTGGTCCCCCACAATCGGCCACCCCTGGCTTTCAGACTGTCGGCCTTTCAGACCCTACTTATAGAGGATTTGAAGACTTCTTCCCGGAAGAGGATATTCGTATTAGAAGTCATGAGATGCTAGAAAATGAAGATATGCAGCATCTGCTCCGTATTTTTAATATGGGAGGGCAACCCCAGACTTCCTTTAATGCTCCTGAAGATGGATATCCTTATTCATCTGCTTACATGCCTGCAACCTCCATGAACTACAACGTAGATGATGAGAGAAACCGTTCCTCAGGAAAGGCTGTTGTGGGCTGGCTCAAGCTTAAGGCAGCTTTGAGATGGGGCATTTTTGTTCGGAAGAAGGCTGCTGAAAGACGGGCACAGCTTGTTGAGCTGGATGACTCATAA 1914 0.4394 MQTRYMERSNSMAREKRSLDSTANQEDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPANLSERSRSSPKRIESPDGGNLQLQFRTRLSLPLFTGGKVEGEQGTAIHIVLIDSNTGHVVTSGPASCVKLDVIVLEGDFNNEDDDTWSQEEFESHVVKEREGKRPLLTGGDLQVTLKEGVGTLADLTFTDNSSWIRSRKFRLGLKVSSGFCEGMRIREAKTEAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKRLTKAGICSVEDVLQLVVRDPQRLRNILGSGMSNKMWEVLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELSGLITNDQYYSADSLSDNQKVYVDTLVKKAYENWMHVVEYDGKSLLNYNQNRTLGTSQHQVPVGSHDYSVSNPLDQQISIPSLPVHVPTGQPSMDPGVAVGGYHHGTTTRFSMQPQNTDLYSALQFGNTAFPLQNLLMSDSHQSQLPSNENELSLGPPQSATPGFQTVGLSDPTYRGFEDFFPEEDIRIRSHEMLENEDMQHLLRIFNMGGQPQTSFNAPEDGYPYSSAYMPATSMNYNVDDERNRSSGKAVVGWLKLKAALRWGIFVRKKAAERRAQLVELDDS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00382 637 Pfam Calmodulin binding protein central domain 260 325 IPR046830 -
Trre3g00382 637 MobiDBLite consensus disorder prediction 1 32 - -
Trre3g00382 637 MobiDBLite consensus disorder prediction 493 517 - -
Trre3g00382 637 PANTHER OS02G0177800 PROTEIN 13 552 IPR012416 GO:0005516
Trre3g00382 637 Pfam Calmodulin binding protein-like N-terminal domain 99 247 IPR046831 -
Trre3g00382 637 Pfam Calmodulin binding protein C-terminal domain 330 392 IPR046829 -
Trre3g00382 637 MobiDBLite consensus disorder prediction 9 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00382 Trre-Chr3 2486434 2491900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00382 1 636 Calmodulin-binding Proteins AT2G18750 63.303 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00382 - - gmx:100802994 1060.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g03690 7 44710310 44714663 Trre3g00382 3 2486434 2491900 PCT