Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00354 ATGGTGGAATTGAATGTACGAAGAAAAATGTTACTACATATTTTATTCACTCTCCCAATCCTTTACATGATCAAAATTGGTAATGCTGCTATGTACACAATTACATCCTCTCAATTCATCAAAGATTCTGAAACTATAAGCTCAAACGATGATGCATTCAAGTTTGGATTCTTCAGTCCCGCTAACACAACAAATCGCTATGTAGGAATTTGGTATCTTGAAGAATCGAACGTCATATGGGTCGCCAATAGAGAAAAACCATTGACAGATTTTTCCGGTATTGTCACCATATCAGATGACAATACGAACCTTCTAGTACTAAATGGACAAAAACATGTTATATGGTCATCAAATGTCTCAAATTTTGCATCAAATTCTAATGTCACGGTACATCTTCAAAATACTGGAAACCTCGTCTTGCTAGAAGACGCTACAGAGAAGACAATATGGGAGAGTTTCAAACATCCAACTAATGCATTCATTCCAAATATGATGATTAGAACCAACCAAAAAACAGGGCAAAAAGTAAAAACGACTTCTTGGAAAACGCCTTCTGATCCAGCTATTGGAAACTTCTCTTTTAGCCTTGAGCGTCTCAACGCTCCAGAATTTTTTGTATGGAAAGATATAAAACCTTATTGGCGCTCGGGTCCATGGAATGGTCAAAAGTTTATCGGTTTACCTAGTCATTCGGTGTATACTTCATATCTAGACGGATTCAACATTGCAAGGGAAAATAATGGAAGTCTTGTTGAGATTACCTATACACTGCCTAATAGTTCTTACTTTGGAACCATGGTGGTGACTTATGAAGGAAAAATGGTTTACACTTTATGGATCAATAGGTATCTAGTTAGCAAGAGTGCTGCTCAAGAAAATGAATGTGATGTTTATGGTTTTTGTGGTCCTAATGGAAATTGTGATTTGAGAAATTTGCCAATATGTTCATGTTTGAAAGGTTTTGAGCCAAAAAACGCGGATGAATGGAATAAACAAAATTGGACTAGTGGATGCGTGAGAAGCGCATCACTACGGTGTGGATTAGGTGGCGAAGGAGATGGATTTATGAAACTAGAGATGAGAAAAGTACCAGATTTTGTGCAACAATCAGATCTTTCAGTTGATGCATGTAGAACTCAGTGCTTGAATGATTGTAATTGCACAGCTTATGGATTTGATGATGGAATAAGATGCTTGACTTGGAGTGGTAATTTAATTGACATAGTTAGATATTCAAGTGGAGGTATTGATCTTTACATACGCCTAGCTAATTCAGAACTTGATACAGATGGGAAGAGAAATGTTAAAAAAATTATCATATCTATAGTGGTGATAGTGGGAGCAATTATTTTTGCCACTTCTACTTATTTCTTATGGTCGCGAGCTTCTAAACGTTCAGAATCAGCAAAGTTATTGATGTTGAATTCAAGCCAAATCCATCCAGAAAGCCAAAATGCAAAAGTGAAACAAGTCAAAATAGAGGACCTTCCTTTATTTGAATTCCAGAAAATATCAACTGCAACAAATAATTTTAGTCCATCTAATAAGATTGGTCAAGGTGGTTTTGGTTCCGTGTACAAGGGAAAATTGCTAGGTGGACTAGAAATAGCAGTGAAAAGACTTTCAAAAACTTCAGGACAAGGTCTAGAAGAATTTATGAATGAAGTGATTGTGATTTCAAAGCTTCAACATCGCAATCTTGTAAGACTCTTAGGTTGTTGCATTGAAGAGGAAGAAAAAATGTTGGTATATGAGTATATGCCTAACAACAGTTTAGATTTTTATCTATTTGACTCGGTAAAAAAGAAGGTTTTAGATTGGAAAAAACGCTTATACATAATCGAGGGAATCTCTCGAGGACTGCTTTATCTTCATAGAGATTCAAGATTAAGAATAATACACAGAGACCTAAAGCCAAGTAATATCTTGTTGGATGAAGAACTGAATCCAAAAATATCAGACTTTGGAATGGCCAGAATCTTTGGTAGCACCGAAAATGAGGGCAGTACAAAAAGGGTTGTCGGAACATATGGATACATGTCTCCAGAATATGTAATGGGAGGACTATTTTCAGAAAAATCAGATGTTTTCAGCTTTGGAGTTTTACTTCTCGAGATAATAAGTGGTAGGAAAAACACAAGTTTTCAGAATCACGAGCAAGCACTTAGCCTCTTAGGATATGCATGGAAACTATGGAATGAAGAGGAGATTGTAACTTTGATAGATCCAGAAATATGTAATCCAGATGATGTAGATGACATTTTGAGATGCATACATATTGGACTTCTTTGTGTGCAAGAAATTGCAAAGGAGAGACCTACTATGGCAACAGTTGTTTCAATGCTTAATAGTGAGATTGTTAAATTTCCTCATCCATCTCAACCTGCATTCATTCTAAGGCAGACTGAACATAGAGGAGACATAGATCAACAGTGTCACAACTTAAATTCTTTGAATAATGTCACTGTCACAAACTTGCAAGGCAGATAG 2490 0.361 MVELNVRRKMLLHILFTLPILYMIKIGNAAMYTITSSQFIKDSETISSNDDAFKFGFFSPANTTNRYVGIWYLEESNVIWVANREKPLTDFSGIVTISDDNTNLLVLNGQKHVIWSSNVSNFASNSNVTVHLQNTGNLVLLEDATEKTIWESFKHPTNAFIPNMMIRTNQKTGQKVKTTSWKTPSDPAIGNFSFSLERLNAPEFFVWKDIKPYWRSGPWNGQKFIGLPSHSVYTSYLDGFNIARENNGSLVEITYTLPNSSYFGTMVVTYEGKMVYTLWINRYLVSKSAAQENECDVYGFCGPNGNCDLRNLPICSCLKGFEPKNADEWNKQNWTSGCVRSASLRCGLGGEGDGFMKLEMRKVPDFVQQSDLSVDACRTQCLNDCNCTAYGFDDGIRCLTWSGNLIDIVRYSSGGIDLYIRLANSELDTDGKRNVKKIIISIVVIVGAIIFATSTYFLWSRASKRSESAKLLMLNSSQIHPESQNAKVKQVKIEDLPLFEFQKISTATNNFSPSNKIGQGGFGSVYKGKLLGGLEIAVKRLSKTSGQGLEEFMNEVIVISKLQHRNLVRLLGCCIEEEEKMLVYEYMPNNSLDFYLFDSVKKKVLDWKKRLYIIEGISRGLLYLHRDSRLRIIHRDLKPSNILLDEELNPKISDFGMARIFGSTENEGSTKRVVGTYGYMSPEYVMGGLFSEKSDVFSFGVLLLEIISGRKNTSFQNHEQALSLLGYAWKLWNEEEIVTLIDPEICNPDDVDDILRCIHIGLLCVQEIAKERPTMATVVSMLNSEIVKFPHPSQPAFILRQTEHRGDIDQQCHNLNSLNNVTVTNLQGR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00354 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 153 - -
Trre3g00354 829 CDD STKc_IRAK 517 783 - -
Trre3g00354 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Trre3g00354 829 SMART ntp_6 350 422 IPR003609 -
Trre3g00354 829 Pfam PAN-like domain 350 408 IPR003609 -
Trre3g00354 829 ProSiteProfiles EGF-like domain profile. 291 327 IPR000742 -
Trre3g00354 829 ProSiteProfiles Bulb-type lectin domain profile. 31 153 IPR001480 -
Trre3g00354 829 SMART blect_4 37 156 IPR001480 -
Trre3g00354 829 Gene3D - 26 154 IPR036426 -
Trre3g00354 829 Gene3D Transferase(Phosphotransferase) domain 1 587 790 - -
Trre3g00354 829 Pfam Protein tyrosine and serine/threonine kinase 514 782 IPR001245 GO:0004672|GO:0006468
Trre3g00354 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 587 790 - -
Trre3g00354 829 Pfam S-locus glycoprotein domain 214 325 IPR000858 GO:0048544
Trre3g00354 829 PIRSF SRK 5 829 IPR024171 GO:0004674
Trre3g00354 829 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 31 773 - -
Trre3g00354 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 221 IPR036426 -
Trre3g00354 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 475 586 - -
Trre3g00354 829 Gene3D Phosphorylase Kinase; domain 1 473 586 - -
Trre3g00354 829 CDD B_lectin 37 156 IPR001480 -
Trre3g00354 829 Pfam D-mannose binding lectin 78 182 IPR001480 -
Trre3g00354 829 SMART serkin_6 511 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00354 829 CDD PAN_AP_plant 344 423 - -
Trre3g00354 829 ProSiteProfiles PAN/Apple domain profile. 346 423 IPR003609 -
Trre3g00354 829 SUPERFAMILY Protein kinase-like (PK-like) 497 804 IPR011009 -
Trre3g00354 829 ProSiteProfiles Protein kinase domain profile. 511 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00354 829 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00354 Trre-Chr3 2310837 2314743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00354 499 829 Receptor kinase-like Gene Family AT3G45860 54.142 5.65e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre3g00354 PK_Tyr_Ser-Thr 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00354 - - mtr:11424236 1161.75