Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00351 ATGTTGCATATTTTATTCACCCTCTCAACCCTTTACATGATCAAAATTGGAGATGCTACTATGTACACAATTACATCCTCTCAATTGATCACAGATTCTCAAACTATAAGCTCAAACGACAGCGCGTTTAAGTTTGGATTCTTCAGTCCCATGAACACAACAAATCGTTACGTAGGAATATGGTATCTCTCTGAATCCAACATTGTATGGGTGGCCAACAGAGAAAACCCATTACAAGATTTTTCTGGTGTTGTCACCATTTCTGATGACAACACAAACCTTTTAGTACTTGATGGACAAAAACAAGTTATATGGTCATCCAATATCCCAAATTTTAAATCAAATTCTAATGTCACTGCACATCTCGAAAATACTGGAAACCTCATCTTACAGGATGACAATACAGGTGGGATAATTTGGGAGAGTTTCAAACATCCATCTAATGCATTCCTTCCGAGTTTGATAATTAGCAACGACCAAACAACAGGTGAAAGAATAAATGTTACTTCATGGAAAACTCCTTCTGATCCGTCTATTGGAAACTTCTTTGGCAGCGTTGAGCGTCTACGTGTTCCTGAAATATTTGTATGGAATGAAACAAAACCTTATTGGCGCTCAGGTCCATGGAATAGTCGAATATTTATTGGTTTACCAAACAATTTGTTGTATATAGCATATCTAGATGGTTTTAGCGTTACAAGGGAAGATAGTGGAAATCTTGTTAAGATCACATTTGCAATGCCAAATAGTTCTTACTTTGGAACTATTGTGGTGAGTTCTGATGGAAAAATTGTGTATACTGCATGGATGGATAGGATTCAAGTTGTGAAACATGTTGTTCAACAAAATGAATGTGATGTTTATGGTATTTGTGGTCCTAATGGAAGCTGTGATTTTAAAAATTTGCCAATATGTACATGTTTGGCAGGTTTTGAGCCAAAAAATGTGGACGAATGGAATCGACAAAATTGGATAAATGGGTGTGTGAGAAAGGCATCACTACAGTGCGAGAGGGTGAAGAATAATGAGAGTGCGTTACATGGTGAGGAAGACGGTTTTTTAAAACTACAGACGACAAAACCACCAGATTTTGTCGAGCAATCATATCTTACTGTTGATTCATGTAGAACTCAGTGTTTGAATAATTGTTCTTGTACTGCTTATGCATTTGATGACGGAATTCGATGCTTGACTTGGAGTGGTAATTTAATAGACATAGTTAGAATGTCAAGTGAAGGCATTGATCTTTACATACGCCAAGCTTATTCAGAACTTGCTATAGATTCAGATGGGAAAAGAAATGTTACTACAGCAATAGTTATAGCTATAGTGATTGTGGTAACAATTATTGTTGTTTCTTGTGCCTATTTCTTTTGGTCACGGGCTTCTAAACGTTCAGGGAAAACCCATCAAGAAAACCAAAGTGCAAGTCTAATTGGAGATGTGAACCAAGTTAAAATAGAGGACCTTCCCTTATTTGAGTTCAAGAACATTTCAACTGCAACAAATAACTTTGATTCAGCTAATAAGATTGGACAAGGTGGTTTTGGATTGGTGTACAAGGGAGAGTTGCTAGGTGGACTAGAAATAGCAGTGAAAAGACTTGCAAAAACTTCAGGACAAGGTTTAGAAGAATTTATGAATGAAGTGATTGTGATTTCAAAGCTTCAACATCGCAATCTTGTAAGACTTTTAGGTTGCTGCATTGAAGGGGAAGAAAAGATGTTGGTCTATGAGTACATGCCTAATAACAGTTTAGATTTTTATCTATTTGACACAATAAAAAAGAAGGTTTTAAATTGGCAAAAAAGGTTATGCATAATTGAAGGAATCTCTCGAGGGCTGCTTTATCTTCATAGAGATTCGAGATTACGAATAATACACAGAGATTTAAAGCCAAGTAATATCTTGTTGGATGGAGAACTAAATCCCAAAATATCCGACTTTGGCATGGCTAGAATCTTTGGAGGTACCGAAAACGAGGGCAATACAAGAAGAATCGTGGGAACATACGGATACATGTCGCCCGAATATGCAATGGAAGGATTGTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGAGTTTTGCTCCTCGAGATAATAAGCGGCAGGAAAAATACAAGTTTCTATAACCACGAGCAAGCACTCAGCCTCTTAGGATATGCATGGAAACTATGGAATGAAGAAGAGGCTGTAACTTTGATAGATCCAGAAATATGTAATCCAGATTATGTAGATGACATTTTGAGATGCATACATATTGGACTTCTTTGTGTTCAAGAGATTGCAAAGGAGAGACCTACTATGGCCACTGTTGTTTCAATGCTTAATAGTGAGATTGTTAAATTTCCTTGCCCATGTCAACCAGCATTCATTCAAAGACAGATTGAGCATAGAGCAGAGTTACCTGAACAGACTGAAAACTTGAATTCCACCAACAATGTCACTATCACAAGCCTGGAAGGCAGATAA 2472 0.3697 MLHILFTLSTLYMIKIGDATMYTITSSQLITDSQTISSNDSAFKFGFFSPMNTTNRYVGIWYLSESNIVWVANRENPLQDFSGVVTISDDNTNLLVLDGQKQVIWSSNIPNFKSNSNVTAHLENTGNLILQDDNTGGIIWESFKHPSNAFLPSLIISNDQTTGERINVTSWKTPSDPSIGNFFGSVERLRVPEIFVWNETKPYWRSGPWNSRIFIGLPNNLLYIAYLDGFSVTREDSGNLVKITFAMPNSSYFGTIVVSSDGKIVYTAWMDRIQVVKHVVQQNECDVYGICGPNGSCDFKNLPICTCLAGFEPKNVDEWNRQNWINGCVRKASLQCERVKNNESALHGEEDGFLKLQTTKPPDFVEQSYLTVDSCRTQCLNNCSCTAYAFDDGIRCLTWSGNLIDIVRMSSEGIDLYIRQAYSELAIDSDGKRNVTTAIVIAIVIVVTIIVVSCAYFFWSRASKRSGKTHQENQSASLIGDVNQVKIEDLPLFEFKNISTATNNFDSANKIGQGGFGLVYKGELLGGLEIAVKRLAKTSGQGLEEFMNEVIVISKLQHRNLVRLLGCCIEGEEKMLVYEYMPNNSLDFYLFDTIKKKVLNWQKRLCIIEGISRGLLYLHRDSRLRIIHRDLKPSNILLDGELNPKISDFGMARIFGGTENEGNTRRIVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRKNTSFYNHEQALSLLGYAWKLWNEEEAVTLIDPEICNPDYVDDILRCIHIGLLCVQEIAKERPTMATVVSMLNSEIVKFPCPCQPAFIQRQIEHRAELPEQTENLNSTNNVTITSLEGR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00351 823 CDD STKc_IRAK 511 777 - -
Trre3g00351 823 SMART blect_4 27 146 IPR001480 -
Trre3g00351 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Trre3g00351 823 ProSiteProfiles PAN/Apple domain profile. 336 421 IPR003609 -
Trre3g00351 823 CDD EGF_CA 283 315 - -
Trre3g00351 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Trre3g00351 823 Pfam Protein tyrosine and serine/threonine kinase 508 776 IPR001245 GO:0004672|GO:0006468
Trre3g00351 823 Gene3D Transferase(Phosphotransferase) domain 1 581 783 - -
Trre3g00351 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 767 - -
Trre3g00351 823 SUPERFAMILY Protein kinase-like (PK-like) 491 809 IPR011009 -
Trre3g00351 823 Pfam S-locus glycoprotein domain 204 315 IPR000858 GO:0048544
Trre3g00351 823 ProSiteProfiles Bulb-type lectin domain profile. 21 143 IPR001480 -
Trre3g00351 823 Gene3D - 16 144 IPR036426 -
Trre3g00351 823 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Trre3g00351 823 Pfam PAN-like domain 349 406 IPR003609 -
Trre3g00351 823 Gene3D Phosphorylase Kinase; domain 1 480 580 - -
Trre3g00351 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 784 - -
Trre3g00351 823 SMART ntp_6 348 420 IPR003609 -
Trre3g00351 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 143 - -
Trre3g00351 823 CDD B_lectin 27 146 IPR001480 -
Trre3g00351 823 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
Trre3g00351 823 FunFam receptor-like serine/threonine-protein kinase SD1-8 478 580 - -
Trre3g00351 823 Pfam D-mannose binding lectin 68 172 IPR001480 -
Trre3g00351 823 SMART serkin_6 505 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00351 823 ProSiteProfiles Protein kinase domain profile. 505 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00351 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 211 IPR036426 -
Trre3g00351 823 CDD PAN_AP_plant 348 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00351 Trre-Chr3 2287268 2291719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00351 431 797 Receptor kinase-like Gene Family AT4G05200 52.316 1.87e-129 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre3g00351 PK_Tyr_Ser-Thr 4.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00351 - - mtr:11424236 1233.78