Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00347 ATGAGTATGAAAGTAATAATTGTTGTTTTTGTTTTTGTTTGTTTATCAATCTTTCATAAAATATCATATGCAGTTGATACTTTGACTCAAAATTCTTCAATTATAAATGGCCAAGAACTCATTTCTTCTGGACAAATTTTTTCTCTTGGTTTCTTTAGTCCAGGAACCTCAAATAAATACTACTTAGGGATATGGTACAAGAATATCACACCTCAAACAGTTGTTTGGGTTGCAAATAGAGAAAAACCACTTAATAGCTTAAGTGGAAACTTAACTATTGGTGTTGATGGGAATATTGTACTTGTTGATGGAGTAGGTAACAAGATATGGTTTACAAATTCATCAAGAACAATTCAAAAGCCATTTGTAAAGTTGTTAGATTCTGGAAACTTGGTCTTGATGGATGGTAAGAATCATGATTCTTATGGTTACATATGGCAAAGTTTTGATTATCCAACAGACACAATGTTACCTGGCATGAAGTTAGGTTGGGATAAGAACTCGGGTATTGATAGATATTTGACATCGTGGAAGAATGATAATGATGACCCTTCTTTTGGAAATTTTACTTACAGGTTTGATTACAAAGAGTTTCCTGAGTTGGTGATTCGTCAAGGAAAGAATATTACATTCAGAAGTGGGATTTGGAATGGCGTTCGTTTTAACTATGATGATTGGATATCGTTGAAAGGAGTTACAGCCTTCAAGCCACAACTTTCAGTAACAAATGACGAGGTAGTGTACTGGGATGAACCTGGAGATAAATTGTCGAGGTTTATGATGAGGGATGATGGATTGTTGGAAAGATATATATGGGACAATAACATTGTTAAGTGGACTAAAATGTACGAGGCAAGAAAAGATTTTTGTGATAACTATGGAGCATGTGGGATGAATGGTATTTGTAATATCGATGATGTGCCTGTTTATTGTGATTGTTTGAAAGGCTTCAAACCTCGATCACAAGATGAATGGGATTTTTTTAATCGTTCCGGTGGGTGTATTAGGAAAATACCTTTGAACTGCACACAAGCTGACAGGTTTCAGAAATTAAGCAGGGTGAAATTGCCGATGTTGTTGAAGTTCTGGACAAATAGTAGCATGAGTCTTGAAGAATGCGAGGTCGAGTGCTTGAAGAATTGTTCTTGCACTGCATATGCAAATTCTGTCATAAATGAAGGGCCTCATGGTTGCTTGATTTGGTTTGGTGATTTGATTGACATTAGGTTGCTTATAAATGAAGATAGTGCACAACTTGAGCTTTATGTAAGGTTAGCTGCTTCAGAAATAGGACAGCAAAACCAGAATGAAGAACAAGCGTCGCCTCTTTTTGATATAGATATCATTCTAGCTGCTACAAACAGTTTTTCTATCGAGAACAAGATTGGAGAAGGAGGTTTTGGTCCAGTGTACAAGGGTATATTGGCTCAAGGACAAGAAATAGCTGTGAAAAGGCTATCAAAAACTTCAAGACAAGGAGTGACAGAGTTCATGAATGAAGTTGGATTGGTAGCCAAGCTACAACACCGCAATCTTGTGAGTGTTTTGGGAGGGTGTACTTATGGAAATGAAAGAATATTGGTCTATGAATTCATGCCTAATGGTAGTTTGAACCACTTCATTTTTGATCCTACACAAGGGAAATTTTTGCAGTGGAGGAAGCGATATGATATCATTACGGGAGTTGCTCGAGGACTACTTTATCTTCATCAAGATTCAAAACTAACCATCATTCATAGGGATCTGAAAACTAGTAACATTCTATTTGACAGTGAATTGAACCCCAAGATATCTGATTTTGGTGTGTCACACATCTTGGAAGGAGGTAGTTCAGCTGTAACAACGAATACAATTGTCGGGACAATTGGTTATATGTCTCCCGAGTATGCGGTAAATGGACTCCTTTCCCTTAAGTCTGATGTATTTAGCTTTGGAGTTATAGTGTTAGAGATATTGAGTGGCATGAGAAATAATCACTTCAAGAATCAAGATCATCACCATAATCTCTTAGGACAGGCATGGATATTATGGAACGAAGGGCGGCCATTGGAATTCATGGATGCTAATATGGACCTTACAAGCATCCCTTATGAAATGCTAAGGTGCCTACAAATTGGTCTTTTGTGTGTTCAAAAATTTCCTGAAGATAGACCAGATATGTCTTCTGTGGTTTTTATGTTGGGAAATGAAAGTATTGCACTTGCACAACCAAACAAGCCTGGCTTCTTTTCAGATGAGATAGAGTTTCATGATTATAGTGAGAAGGACTCTTTTAGCAACAATGCTATGACTATTACCCTATTGGAAGCACGAAATTAG 2319 0.3691 MSMKVIIVVFVFVCLSIFHKISYAVDTLTQNSSIINGQELISSGQIFSLGFFSPGTSNKYYLGIWYKNITPQTVVWVANREKPLNSLSGNLTIGVDGNIVLVDGVGNKIWFTNSSRTIQKPFVKLLDSGNLVLMDGKNHDSYGYIWQSFDYPTDTMLPGMKLGWDKNSGIDRYLTSWKNDNDDPSFGNFTYRFDYKEFPELVIRQGKNITFRSGIWNGVRFNYDDWISLKGVTAFKPQLSVTNDEVVYWDEPGDKLSRFMMRDDGLLERYIWDNNIVKWTKMYEARKDFCDNYGACGMNGICNIDDVPVYCDCLKGFKPRSQDEWDFFNRSGGCIRKIPLNCTQADRFQKLSRVKLPMLLKFWTNSSMSLEECEVECLKNCSCTAYANSVINEGPHGCLIWFGDLIDIRLLINEDSAQLELYVRLAASEIGQQNQNEEQASPLFDIDIILAATNSFSIENKIGEGGFGPVYKGILAQGQEIAVKRLSKTSRQGVTEFMNEVGLVAKLQHRNLVSVLGGCTYGNERILVYEFMPNGSLNHFIFDPTQGKFLQWRKRYDIITGVARGLLYLHQDSKLTIIHRDLKTSNILFDSELNPKISDFGVSHILEGGSSAVTTNTIVGTIGYMSPEYAVNGLLSLKSDVFSFGVIVLEILSGMRNNHFKNQDHHHNLLGQAWILWNEGRPLEFMDANMDLTSIPYEMLRCLQIGLLCVQKFPEDRPDMSSVVFMLGNESIALAQPNKPGFFSDEIEFHDYSEKDSFSNNAMTITLLEARN 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00347 772 SMART ntp_6 343 425 IPR003609 -
Trre3g00347 772 PIRSF SRK 431 771 IPR024171 GO:0004674
Trre3g00347 772 PIRSF SRK 1 442 IPR024171 GO:0004674
Trre3g00347 772 Gene3D - 20 149 IPR036426 -
Trre3g00347 772 Pfam D-mannose binding lectin 73 178 IPR001480 -
Trre3g00347 772 Gene3D Phosphorylase Kinase; domain 1 420 531 - -
Trre3g00347 772 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Trre3g00347 772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 422 531 - -
Trre3g00347 772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 532 735 - -
Trre3g00347 772 Pfam Protein kinase domain 457 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00347 772 SMART serkin_6 456 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00347 772 CDD PAN_AP_plant 339 426 - -
Trre3g00347 772 Gene3D Transferase(Phosphotransferase) domain 1 532 738 - -
Trre3g00347 772 CDD B_lectin 31 152 IPR001480 -
Trre3g00347 772 SUPERFAMILY Protein kinase-like (PK-like) 440 727 IPR011009 -
Trre3g00347 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Trre3g00347 772 ProSiteProfiles Protein kinase domain profile. 456 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00347 772 SMART blect_4 31 152 IPR001480 -
Trre3g00347 772 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Trre3g00347 772 CDD STKc_IRAK 462 727 - -
Trre3g00347 772 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Trre3g00347 772 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 10 718 - -
Trre3g00347 772 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Trre3g00347 772 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 149 - -
Trre3g00347 772 Pfam PAN-like domain 342 408 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00347 Trre-Chr3 2262895 2265940 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00347 428 744 Receptor kinase-like Gene Family AT4G38830 55.937 1.72e-112 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre3g00347 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00347 - - gmx:102669607 1238.79