Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00344 ATGTTTGGTGGAGATCAAACTGAAGAAAATACCAAAAGGGCAGTTGGAACATATGGATATATGCCTCCAGAGTATGCAATGGATGGACATTTCTCTTTCAAATCTGATGTATATAGCTTTGGAGTTTTACTTTTAGAGTTATTAAGTGGCAAGAAAAACAAAGGATTTTTTCACCCAGATCACAAATTGAATCTCCTAGGCCATGCATGGAAGCTTTGGAATGAAAATAGGGCCATTGAGTTAATTGATCCATTACTTGAGGATCAAGTTACTACCCATGAATCAATTTTAAAGTGTATTCAAATTGGTCTTTTATGTGTTCAACAACATCCAGAAGAAAGACCAACAATGTCATCAGTAGTTTTGATGTTGGATGGTGAAAGTGTGTTGGTCCCTAAACCTAGAAGACCAGGTTTGTATTCAGAGAGATGTTTCTTAGACACAGATTCATCATCACGTGGTATGCTCAATTCTGGTTCCAATGACATAACTGTTACCACTACTTTAGTTGAAGGTCGTTAA 522 0.3659 MFGGDQTEENTKRAVGTYGYMPPEYAMDGHFSFKSDVYSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWNENRAIELIDPLLEDQVTTHESILKCIQIGLLCVQQHPEERPTMSSVVLMLDGESVLVPKPRRPGLYSERCFLDTDSSSRGMLNSGSNDITVTTTLVEGR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00344 173 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 2 129 - -
Trre3g00344 173 ProSiteProfiles Protein kinase domain profile. 1 130 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00344 173 Pfam Protein tyrosine and serine/threonine kinase 9 122 IPR001245 GO:0004672|GO:0006468
Trre3g00344 173 SUPERFAMILY Protein kinase-like (PK-like) 9 139 IPR011009 -
Trre3g00344 173 Gene3D Transferase(Phosphotransferase) domain 1 2 135 - -
Trre3g00344 173 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00344 Trre-Chr3 2251121 2251973 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00344 1 140 Receptor kinase-like Gene Family AT4G23150 51.429 5.21e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre3g00344 PK_Tyr_Ser-Thr 4.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00344 - - mtr:11421613 337.421