Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00329 ATGGCACCAAAGAAACGTCTCCCTTCTCCTTCTCTTGAAGATGATCACCCACCTTCAACCCAAAAACAGCCAGAAGACGAAGTTGATTCATCCGATGAAGAAGAAGACTCTTCTTCATCCGAAGAAGAAGATTTTCAAATTCAACCCGTTTCCAAAAACCCTCCACCTTCTACTCCGATCTCAAACCCTAAACCTGCTTCTGAATCCGAATCGGAATCTGGATCAGACTCCGGTTCTGATTCCGGATCTGGATCCGATTCTGAAACTGATTCCGAACCGGAACCAACTCCACCTCCTAAACCACTCGCTTCCAAGCCCATGAAGGCCCAACCAAAGCCCCAAACCCAGGCCCAATCAACTCCTGTACCAGCCAAATCCGGAACAAAACGTCCCGTCGAGAACGGAAATGACTCTAACCGTTCGAAGAAGAAAACAACCGCAGCTGCTGTTTCCGACGATGAGAGTGAGACTGAGGAAGACGTGAAGTTGACTGGAGAAGATTCAAAGAAGAGTACTCAGAGAATTTTCGGCGAAGAAGACGAGCTTTCCATTCTCAAAGGTCTTGCTGATTTCATTTCAAAAACTGGAAAAGATCCGTTGAAGGATGGACCTGCATTTCACAGTTTTGTTAAGAAATCGCTTCGTGCTGAAGCTAACAGCGAACAACTGAAGCGAAAGGTTCGTACTTTGAAGAAGAAGTTTGAAGCTAGTGATAGTTTCACTAAACCCCATGATAAGAAAGCTTTTGAGCTTTTCAAAAAGGTTTGGGGTAACAATGGTGCAAATGAAGCTGAAGAAAATGGTAAAGTTAATAAGGGTGTTAAGAAGGAAGCTACTAATGGTGGTTCTGTTAAGAAGGAAACTGTAAAAGTGGAAAGTGAGGTTGATAAGAGTTTGTCATGGAATGAAATGTGTCGGTTTACTGATAGTTTGGGTTTGTCTGCTTTTAATAGGGATGCTATGAGAACTGGATACGAATTGCTCCCGGAATCGAAGAAGGTTGAATTGGCGGAAAGGTGGAGGAAGATACAAGTTGCTGAAATGGAGGTGCTTATGGAACGTTCGCGGCTGGTTAAGGATCAGAGTAACTTGGTATTGCAGGCTGTCAATAAATCAAACAAGTAG 1125 0.4373 MAPKKRLPSPSLEDDHPPSTQKQPEDEVDSSDEEEDSSSSEEEDFQIQPVSKNPPPSTPISNPKPASESESESGSDSGSDSGSGSDSETDSEPEPTPPPKPLASKPMKAQPKPQTQAQSTPVPAKSGTKRPVENGNDSNRSKKKTTAAAVSDDESETEEDVKLTGEDSKKSTQRIFGEEDELSILKGLADFISKTGKDPLKDGPAFHSFVKKSLRAEANSEQLKRKVRTLKKKFEASDSFTKPHDKKAFELFKKVWGNNGANEAEENGKVNKGVKKEATNGGSVKKETVKVESEVDKSLSWNEMCRFTDSLGLSAFNRDAMRTGYELLPESKKVELAERWRKIQVAEMEVLMERSRLVKDQSNLVLQAVNKSNK 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00329 374 MobiDBLite consensus disorder prediction 27 42 - -
Trre3g00329 374 MobiDBLite consensus disorder prediction 109 125 - -
Trre3g00329 374 PANTHER BNAANNG10740D PROTEIN-RELATED 42 368 IPR007592 GO:0006355
Trre3g00329 374 MobiDBLite consensus disorder prediction 8 26 - -
Trre3g00329 374 Pfam Protein of unknown function, DUF573 173 257 IPR007592 GO:0006355
Trre3g00329 374 MobiDBLite consensus disorder prediction 1 172 - -
Trre3g00329 374 Coils Coil 213 233 - -
Trre3g00329 374 MobiDBLite consensus disorder prediction 63 91 - -
Trre3g00329 374 MobiDBLite consensus disorder prediction 92 106 - -
Trre3g00329 374 MobiDBLite consensus disorder prediction 135 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00329 Trre-Chr3 2168771 2169895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00329 77 368 GeBP Transcription Factor Family AT1G61730 31.776 1.04e-35 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trre3g00329 DUF573 8e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00329 - - mtr:11424230 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre3g00329 3 2168771 2169895 Trre3g00329 3 2168771 2169895 ECH