Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00328 ATGTTTTCCCGGAACCAGAATCGGCCACCGCGAAGTCCCGCCAACATGCAGAGAAAAATCGGTGAAGAAATTCCTTCAGATAAGCGTAGAAGGATTGGTGGTGAAAGAATGGTTGGACAGGGTAGAGCTAGGGCTCCATTTGGTGCTGTAAACAACAAATCAGAAGCTAATGATGGTGGTACTGGTACCGGTGCTGCTGAGGGATCTGAACCCACCATTGTTGATTTCACTAAAGAGGAAGTAGAAGCTTTGTTGAATGAGAGGATGAAGAAGGATACTCGCTTAGATACTAAGAAAAAAATGGAGCAGATGGGGGATCTTATTAAGAGACTTAAAAACTGTGTTAGATGGTTTAAGAGAGTTGAAGAAGGGTATGTTCAAGAAAAGGAAAAGCTTCAGACAGATCTAGAATCTGCTGAGAAGAAATGCGTTGATATCGAGAATGAAATGAAAATTAAGATAGCAGAATTGAATGAGGCTATATCGAATTTGAGAATGACGATTTCCTCTTTAGAAGAGAAGATTGCAAAGGAAGAATCAGATAAATTGGAAGCGATTGAATGTTGTAGAAAAGAAAAAGAAGCCAGAAATGAAGCTGAGCAGATGAACGTTTCGCTTACAACTGAACTCGAGAAAGTTTCCAATGCGAAATCAGCTGCTGAGCAGAAGGCCATTGCAAACGAGGAAATGTACAAGACATCGCAAGAGTTCAATAATAGGTTGCTGCAGCACAATAGTTGTCTTCAGTCAAATCTTGAAACCACTAATGAGGCACATAAGCGACTGGAAACAGAGAAATCCAGTATTGTTGAACACCTTAGCACTGTAAGAGGCCACAATAAGGCATTGCAAGAGCAGTTGGCATCTCTTAAAGCTTCACAGGATGAGGCAACAAAGGCAAAAGACATTTTAGCTAATGAACTCAAATGCCTCCGAGAGGAGCTAAAACAAATTAGAGACGATCGTGATCGCCAACTGGGACAAGTGCAATCTTTAACTGGAGAAGTAGCAAAATATAAAGAATATACAGGGAAGTCAGGTGAACAATTGGGTACATTGACCGCTAAAACAAGTGCACTTGAGGAGGTATGTACTTCACAAAGACAACAAATAGATATGTTGCAGCAGCAATTGAATGCTGAAAAGGAGAAGTTAAAGATGGCTGATTTATCTCATTCAGAAACGAGAACAGTGTTTGAAGACCAGAAAAGAATTATAGGTCAACTACGAGAGAGACTGGAAGAAAAAGAACAGCAAGTAATCGAAGGGGAGTCATTACGGAAAAAACTGCACAACACCATTCTGGAATTAAAAGGAAATATCCGCGTGTTCTGCCGTGTCCGACCTTTGCTACCTGATGATGGTCCTGCTGCAGATATGGTTGTTTCGTTCCCGTCGTCAACAGATGCTCTTGGCCGGGGTGTTGAATTAGCACAGAGTGGGCAGAAGTACTCGTTTACATTTGACAAAGTATTTAATAACAAGGCTTCACAGGAGGATGTTTTCACAGAGATTTCTCAGCTGGTACAAAGTGCACTTGATGGGTACAAGGTTTGCATTTTTGCTTATGGACAAACAGGTTCTGGAAAAACCTACACAATGATTGGCAGGCCTGGTCCACCTGAGCTGAAAGGATTGATCCCTCGTTCACTTGAACAGATATTCCTGGTTAGTCAGGCCCTGAAAGATCAAGGGTGGAAGTACACAATGCAGGCCTCGGTACTTGAAATATACAACGAGACCATAAGGGATCTGTTATCACCAACAGAAAATCCTGGAAAGAAGTACAATATTGTACATGATGCTAATGGAAACACATATGTTCCAGATCTGACTATTGTAGATGTTTGCGGCGCAGATGAGATTTCCACCCTCCTACAAAAGGCTGCACAAAGCAGGTCAGTAGGCAGAACACAGATGAATGAACAATCGTCGCGAAGTCACTTTGTCTTTACTCTGCGAATAAGCGGCATAAATGAGAATACCGAGCAACAGGTTCAAGGTGTTCTAAACCTGATTGATCTTGCTGGAAGTGAAAGGCTGTCGAAAAGTGGAGCAACTGGGGACCGTCTGAATGAAACTAAGGCAATAAACAAAAGCCTTTCCTGTTTGAGTGATGTCATTTTTGCCTTGGCAAAGAAAGAGGATCATGTCCCCTTTAGGAATTCTAAACTAACGAACTATCTCCAGCCATACTTGGGTGGAGACTCCAAGACATTAATGTTTGTAAATATATCTCCCGACCCATCTTCAACAGGAGAATCACTTTGTTCTCTACGTTTTGCTGCAAGAGTTAATAGCTGCGAGATTGGCATTCCACGGCGCCAAACATCTGCAAAGTTATCTGATTCTCGTTTGAGCTATGGCTAA 2370 0.4194 MFSRNQNRPPRSPANMQRKIGEEIPSDKRRRIGGERMVGQGRARAPFGAVNNKSEANDGGTGTGAAEGSEPTIVDFTKEEVEALLNERMKKDTRLDTKKKMEQMGDLIKRLKNCVRWFKRVEEGYVQEKEKLQTDLESAEKKCVDIENEMKIKIAELNEAISNLRMTISSLEEKIAKEESDKLEAIECCRKEKEARNEAEQMNVSLTTELEKVSNAKSAAEQKAIANEEMYKTSQEFNNRLLQHNSCLQSNLETTNEAHKRLETEKSSIVEHLSTVRGHNKALQEQLASLKASQDEATKAKDILANELKCLREELKQIRDDRDRQLGQVQSLTGEVAKYKEYTGKSGEQLGTLTAKTSALEEVCTSQRQQIDMLQQQLNAEKEKLKMADLSHSETRTVFEDQKRIIGQLRERLEEKEQQVIEGESLRKKLHNTILELKGNIRVFCRVRPLLPDDGPAADMVVSFPSSTDALGRGVELAQSGQKYSFTFDKVFNNKASQEDVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMIGRPGPPELKGLIPRSLEQIFLVSQALKDQGWKYTMQASVLEIYNETIRDLLSPTENPGKKYNIVHDANGNTYVPDLTIVDVCGADEISTLLQKAAQSRSVGRTQMNEQSSRSHFVFTLRISGINENTEQQVQGVLNLIDLAGSERLSKSGATGDRLNETKAINKSLSCLSDVIFALAKKEDHVPFRNSKLTNYLQPYLGGDSKTLMFVNISPDPSSTGESLCSLRFAARVNSCEIGIPRRQTSAKLSDSRLSYG 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00328 789 MobiDBLite consensus disorder prediction 1 69 - -
Trre3g00328 789 Pfam Kinesin motor domain 446 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g00328 789 MobiDBLite consensus disorder prediction 21 37 - -
Trre3g00328 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 400 767 IPR027417 -
Trre3g00328 789 PRINTS Kinesin heavy chain signature 515 536 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g00328 789 PRINTS Kinesin heavy chain signature 669 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g00328 789 PRINTS Kinesin heavy chain signature 718 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g00328 789 PRINTS Kinesin heavy chain signature 638 655 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g00328 789 ProSiteProfiles Kinesin motor domain profile. 440 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g00328 789 Coils Coil 189 223 - -
Trre3g00328 789 SMART kinesin_4 438 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre3g00328 789 Coils Coil 280 328 - -
Trre3g00328 789 Coils Coil 364 391 - -
Trre3g00328 789 ProSitePatterns Kinesin motor domain signature. 668 679 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre3g00328 789 Gene3D Kinesin motor domain 384 770 IPR036961 -
Trre3g00328 789 Coils Coil 122 181 - -
Trre3g00328 789 Coils Coil 399 426 - -
Trre3g00328 789 PANTHER KINESIN-LIKE PROTEIN KLP-3 111 776 IPR027640 GO:0003777|GO:0007018
Trre3g00328 789 CDD KISc_C_terminal 438 770 - -
Trre3g00328 789 FunFam Kinesin-like protein 386 770 - -
Trre3g00328 789 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00328 Trre-Chr3 2156406 2162553 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00328 416 780 Calmodulin-binding Proteins AT5G65930 40.164 4.43e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00328 K10405 - gmx:100808278 1139.41