Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00322 ATGTTAGGACTCAATATTGGGCAAGGAAACATGTTACATATTTTATTCACTCTCTTAACCCTTTGTTGCACCATAGTGAACATTGGTGGTGCTTCGGTGAACACAATTACAAAGTCTCAAATATTGATCAAAGATCCTGAAACTATAAGCTCTGCCGACGGTGCATTCAAGCTTGGATTCTTCAACCCCATCAACACAACTAATCGCTACGTAGGAATATGGTATGTCTCTGAATCCGACGTCGTATGGGTAGCCAATAGAGAAACACCACTACATGATTCTTCTGGTGTTGTCACCATATCCGATGACAACACAAACCTTTTAGTATTGAATGGACAAAAACATATTATATGGTCGTCAAATGTATCAAATATTGCACCGAATTTTAATGTCACCGTTCAACTTCAAAATACTGGAAATCTCATCTTGCAGGAAAACTCAACAGATAGGATAATATGGTCGAGTTTCAAACATCCAACTGATACATTCATTCCAAATATCATAATAAGCACAAACCAAATAACAGGAGAAAGAGTAGAAGCTACTTCATGGAAAAGTCCTTCTGATCCGGCTATTGGAAACTTTACTGGCGGCCTTGAGCGTCTCAGTGCTCCTGAAATTTTTATATGGAACCGAAAAAAACCTTCTTGGCGTTCAGGTCCATGGAATGGTCAAGCTTTTCTTGGATTGAGAACTAATTTGTTGTCTACTTCTGCATATCTAAATGGATTTACCTTTACAAGGAAAGATAATGGAAGTCTTGTTGAGATTTCATATACATTGCCAAATAGTTCTTACTTTGGAACCCTTGTGGTGGATTATGAAGGACATCTTGTGTATACGGCATGGATCAATAGGTTTCAAGTTAGGAAGCGGGTTGTTCAACAAAACAAATGCGATGTTTATGGTATTTGTGGTCCTAATGGAAGCTGTGATTTTAAAGATTCCGCACCAATATGTACATGTTTGACAGGTTTTGAGCCAAAAAACGCGGACGAATGGAATAGACAAAGTTGGATAAATGGGTGTGTGAGAAAGGCATCACTAAAGTGTGAGAGGGTGAAAAATAATAGGAATGCATTAGATGGTGAAGAAGATGGGTTTATAAAACTACAGACGACAAAACCACCGGATTTTGTGGAGCAATCATATCTTTCTGAGGATGCATGTAGAACTCAGTGCTTGAATGATTGTAATTGCACAGCTTATGGATATGATGTTGGAATTCGTTGCTTGACTTGGAAAGGGAAATTAATTGACATAGTGAGGTTTACAAGTGGAGGCATCGATCTTTACATACGCCAACCTTATTCAGAACTTGCATCTATACATACAAATGAGATTCATGGGAAGAGAAATGTTACACCAATCATCATTGCTGCTGTGATAGTGAGTGCAATTATTGTTGCTACTTGTGCTTATTTCTTTTGGTCATGGGCTTCTAAACGTTCAGGGCAAACCCATCAAGAAAACCCATTTGCAAGTCTACGTGGAGATGTGAAACAAGTTAAAATAGAGGACCTTCCTTTATTTGAGTTCAAAAACATTTCAACTGCAACAAATAACTTTAGTTTAGCTAATAAGATTGGACATGGTGGTTTTGGTTCAGTGTACAAGGGAGAATTGCCAGATGGATTAGAAATAGCAGTGAAACGGCTTTCAAGAACATCAGGACAAGGTCTAGAGGAATTTATGAATGAAGTGATTGTGATTTCAAAGCTTCAACATCGCAATCTTGTAAGACTTTTAGGTTGCTGCATTGAAGGAGAAGAAAAGATGTTGGTTTATGAGTACATGCCTAATAACAGTTTAGATTTTTATCTATTTGACCCGGTAAAAAAGAAGATTTTAGATTGGCAAAAACGGCTATATATAATTCAAGGAATCTCTCGAGGGTTGCTTTATCTTCATAGAGATTCGAGATTGAGAATAATACACAGAGACCTAAAGCTAAGTAATATCTTGTTGGATGGAGAGCTTAATCCAAAAATATCTGACTTTGGCATGGCTAAAATCTTTGGAAGTAGTGAAAATGAGGGAAATACAAGAAGGATTATGGGAACATATGGATACATGTCTCCAGAATATGCAATGGAAGGATTGTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGAGTTTTGCTCCTTGAGATAATAAGCGGTAGGAAAAACACAAGTTTCTATAATCATGATCAAGCACTTAGCCTCTTAGGATATGCATGGAAACTATGGAATGAAGAGGAGATTGTAACTTTGATAGATCCAGAAATATGTAATTCAGATTATGTGGATGACATTTTGAGATGCATACATATTGGACTACTTTGTGTGCAAGAAATTGCAAAGGAGAGACCTACTATGGCAACAGTTGTTTCAATGCTTAATAGTGAAATTGTTAAATTTCCTCGTCCATTTCAACCTGGATTCATTCTAAGACAGACTGAACAGAGAAGAGACATAGATCAACATTGTAACAACTTTAATTCTTTGAACAATGTCAGTGTCACAAGCTTACAAGGTAGATAG 2526 0.3698 MLGLNIGQGNMLHILFTLLTLCCTIVNIGGASVNTITKSQILIKDPETISSADGAFKLGFFNPINTTNRYVGIWYVSESDVVWVANRETPLHDSSGVVTISDDNTNLLVLNGQKHIIWSSNVSNIAPNFNVTVQLQNTGNLILQENSTDRIIWSSFKHPTDTFIPNIIISTNQITGERVEATSWKSPSDPAIGNFTGGLERLSAPEIFIWNRKKPSWRSGPWNGQAFLGLRTNLLSTSAYLNGFTFTRKDNGSLVEISYTLPNSSYFGTLVVDYEGHLVYTAWINRFQVRKRVVQQNKCDVYGICGPNGSCDFKDSAPICTCLTGFEPKNADEWNRQSWINGCVRKASLKCERVKNNRNALDGEEDGFIKLQTTKPPDFVEQSYLSEDACRTQCLNDCNCTAYGYDVGIRCLTWKGKLIDIVRFTSGGIDLYIRQPYSELASIHTNEIHGKRNVTPIIIAAVIVSAIIVATCAYFFWSWASKRSGQTHQENPFASLRGDVKQVKIEDLPLFEFKNISTATNNFSLANKIGHGGFGSVYKGELPDGLEIAVKRLSRTSGQGLEEFMNEVIVISKLQHRNLVRLLGCCIEGEEKMLVYEYMPNNSLDFYLFDPVKKKILDWQKRLYIIQGISRGLLYLHRDSRLRIIHRDLKLSNILLDGELNPKISDFGMAKIFGSSENEGNTRRIMGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRKNTSFYNHDQALSLLGYAWKLWNEEEIVTLIDPEICNSDYVDDILRCIHIGLLCVQEIAKERPTMATVVSMLNSEIVKFPRPFQPGFILRQTEQRRDIDQHCNNFNSLNNVSVTSLQGR 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00322 841 Pfam Protein tyrosine and serine/threonine kinase 525 794 IPR001245 GO:0004672|GO:0006468
Trre3g00322 841 Gene3D Transferase(Phosphotransferase) domain 1 599 801 - -
Trre3g00322 841 ProSiteProfiles EGF-like domain profile. 295 332 IPR000742 -
Trre3g00322 841 FunFam receptor-like serine/threonine-protein kinase SD1-8 497 598 - -
Trre3g00322 841 Gene3D Phosphorylase Kinase; domain 1 486 598 - -
Trre3g00322 841 Gene3D - 30 157 IPR036426 -
Trre3g00322 841 CDD B_lectin 42 159 IPR001480 -
Trre3g00322 841 Pfam PAN-like domain 364 421 IPR003609 -
Trre3g00322 841 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 190 IPR036426 -
Trre3g00322 841 ProSiteProfiles Protein kinase domain profile. 523 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00322 841 ProSiteProfiles Bulb-type lectin domain profile. 33 156 IPR001480 -
Trre3g00322 841 CDD STKc_IRAK 529 795 - -
Trre3g00322 841 Pfam D-mannose binding lectin 81 185 IPR001480 -
Trre3g00322 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 29 156 - -
Trre3g00322 841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Trre3g00322 841 CDD PAN_AP_plant 362 434 - -
Trre3g00322 841 SMART serkin_6 523 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre3g00322 841 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 18 785 - -
Trre3g00322 841 PIRSF SRK 8 841 IPR024171 GO:0004674
Trre3g00322 841 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Trre3g00322 841 ProSiteProfiles PAN/Apple domain profile. 351 436 IPR003609 -
Trre3g00322 841 SMART ntp_6 363 435 IPR003609 -
Trre3g00322 841 SMART blect_4 40 159 IPR001480 -
Trre3g00322 841 Pfam S-locus glycoprotein domain 217 330 IPR000858 GO:0048544
Trre3g00322 841 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 599 802 - -
Trre3g00322 841 SUPERFAMILY Protein kinase-like (PK-like) 507 794 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00322 Trre-Chr3 2121824 2126121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00322 452 819 Receptor kinase-like Gene Family AT4G05200 52.174 2.50e-130 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre3g00322 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00322 - - mtr:11424236 1244.18