Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre3g00308 ATGGGGTCTAATTTCTTATGGTTCCCCATTCTTGTGAGTCTTATCATTTTGATCCTAACTGTGGCAAAGAGAATAAAAAGTAGGGACAAAATTACCTCAAATCTTCCTCCTGGACCTTGGATGCTACCAATATTTGGAAGCATACACCACCTAATTGGCTCCTTACCCCACCATAGAATGAGAGAATTGTCCCAAAAATATGGTCCAATCATGCACCTACAACTTGGAGAAACTACAACCATAGTAATTTCTTCTAAAGAAATTGCCAAAGAAGTCTTGAAAATAAATGATGTTTCATTTGCTCAAAGACCTAGATTACTTGGTTCAGAAATTATTACTTATGGTTGCACTAACATTGCATTTGCACCCTATGGAGATTATTGGAGACAACTAAGAAAAATATGCACATTGGAGTTATTTAGTGCTAAACGGGTGAAATCATTTCAATCAATTAGGGAGGAAGAGGTGTCAAATTTAATAAAATATATTTCTCTAAACATTGGATCTACTATTAACCTCACTCATGAAATTTTATCTATGTCATATAATATAGTTTCTAGGTCAGCTTTTGGTGATAAATGCAAGGAGCAAGAAACATATATTATGTTCATCAAGGAACTTTTAAAGGTAGCTGAGAGTTTCAGTGTCACTAATTTGTTTCCCTCACAACATTGGCTACATGTGATTAGTGGAATGGAGCATAAATTGTTGAATTATCATAGAACTGGTGATATGATTCTTGAAAAGATCATCAACAACGCAAAAACAAAGATTGGTCGAGATGGAAGTCTTCTGTCCTATCTTTTGAGCCTCAATGATCATGCATCTCCTAACTTTGATGGATTTCATTTGACAATCAACAACATTAAAGCTATTATTCAGGATATTACAATTACTGGAACTGACACATCATCTACAACTTTAGAATGGGCTTTCTCAGAAATGCTGAAAAATCCAAGAGTACTAAGAAAAGCTCAAGCAGAAGTTAGACAAGTTTTTGAAACCAGAGGAAATATTGATGAAATGGCCCTTAAAGAATTGAAATATCTAAAAGCAGTGATTAAAGAAACTTTAAGATTTCATCCTCCCGGTCCTCTACTACTTCCTAGAGAGTGTATGGAAACGTGTGAGATTAGTGGATACACAATACCAGCCGGAGCACAAGTGTTTCTGAATGCATGGGCAATTGGAAGAGACCAAAAGTATTGGAGTGAAGGAGAAAAGTTTTACCCAGAGAGATTCATGGATTGTTCAATTGACTACAAAGGGTCTGATTTTGAGTTCTTACCTTTCGGTGCAGGGAGGAGAATATGTCCAGGCATCTTGTTTTCTGAACCTAATATAGAACTTCCTCTCGCACAAATGTTGTACTATTTTGATTGGAAACTTCCCTATGGAACTAGTCATGAAAGTTTTGATATGACTGAATCCTTTGGCGCTACCGTGAAAAGGAAAAGTGAATTATTTGTAATTCCAATTCCTTACAATCGTATCTCTTAA 1500 0.3573 MGSNFLWFPILVSLIILILTVAKRIKSRDKITSNLPPGPWMLPIFGSIHHLIGSLPHHRMRELSQKYGPIMHLQLGETTTIVISSKEIAKEVLKINDVSFAQRPRLLGSEIITYGCTNIAFAPYGDYWRQLRKICTLELFSAKRVKSFQSIREEEVSNLIKYISLNIGSTINLTHEILSMSYNIVSRSAFGDKCKEQETYIMFIKELLKVAESFSVTNLFPSQHWLHVISGMEHKLLNYHRTGDMILEKIINNAKTKIGRDGSLLSYLLSLNDHASPNFDGFHLTINNIKAIIQDITITGTDTSSTTLEWAFSEMLKNPRVLRKAQAEVRQVFETRGNIDEMALKELKYLKAVIKETLRFHPPGPLLLPRECMETCEISGYTIPAGAQVFLNAWAIGRDQKYWSEGEKFYPERFMDCSIDYKGSDFEFLPFGAGRRICPGILFSEPNIELPLAQMLYYFDWKLPYGTSHESFDMTESFGATVKRKSELFVIPIPYNRIS 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre3g00308 499 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Trre3g00308 499 FunFam Cytochrome P450 99A2 25 493 - -
Trre3g00308 499 Gene3D Cytochrome P450 28 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 CDD CYP71-like 66 488 - -
Trre3g00308 499 SUPERFAMILY Cytochrome P450 36 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 Pfam Cytochrome P450 36 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre3g00308 499 PANTHER OS08G0105600 PROTEIN 58 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre3g00308 Trre-Chr3 2023324 2025009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre3g00308 6 492 Cytochrome P450 AT3G26310 39.798 9.02e-127 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre3g00308 - K23807 jre:108983453 567.385